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  5. Dde_g09937

Dde_g09937


Description : not classified & original description: none


Gene families : OG0002966 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002966_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g09937
Cluster HCCA: Cluster_154

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00084p00036460 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT5G24740 No alias Protein of unknown function (DUF1162) 0.05 OrthoFinder output from all 47 species
Adi_g011972 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g14267 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g05069 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g15131 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.03G037800.1 Ceric.03G037800 not classified & original description: pacid=50571745... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000042.92 No alias No description available 0.02 OrthoFinder output from all 47 species
Dac_g40218 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g05849 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01019366001 No alias No description available 0.06 OrthoFinder output from all 47 species
GSVIVT01019369001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_28330 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os08g02350.1 LOC_Os08g02350 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
LOC_Os08g02354.1 LOC_Os08g02354 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Len_g23021 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10435329g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp7g13250.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Pir_g05470 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo439148 No alias No description available 0.06 OrthoFinder output from all 47 species
Spa_g22653 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004559 alpha-mannosidase activity IEP HCCA
MF GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEP HCCA
MF GO:0005049 nuclear export signal receptor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0009306 protein secretion IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0015923 mannosidase activity IEP HCCA
MF GO:0015924 mannosyl-oligosaccharide mannosidase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0035592 establishment of protein localization to extracellular region IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046903 secretion IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071692 protein localization to extracellular region IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140142 nucleocytoplasmic carrier activity IEP HCCA
BP GO:0140352 export from cell IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR031642 VPS13_mid_RBG 640 886
IPR026854 VPS13-like_N 9 122
IPR009543 VPS13_VAB 2088 2313
IPR031646 VPS13_extend_chorein 147 377
IPR031645 VPS13_DH-like 2629 2801
No external refs found!