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  5. Dde_g09855

Dde_g09855 (LPA3)


Aliases : LPA3

Description : protein involved in PS-II assembly *(LPA3) & original description: none


Gene families : OG0005820 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005820_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g09855
Cluster HCCA: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00044p00143330 LPA3,... Photosynthesis.photophosphorylation.photosystem... 0.03 OrthoFinder output from all 47 species
AT1G73060 LPA3 Low PSII Accumulation 3 0.05 OrthoFinder output from all 47 species
Aob_g08359 LPA3 protein involved in PS-II assembly *(LPA3) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0472.g072941 LPA3 protein involved in PS-II assembly *(LPA3) & original... 0.03 OrthoFinder output from all 47 species
Cba_g08348 LPA3 protein involved in PS-II assembly *(LPA3) & original... 0.04 OrthoFinder output from all 47 species
Ceric.04G069900.1 LPA3, Ceric.04G069900 protein involved in PS-II assembly *(LPA3) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g14491 LPA3 protein involved in PS-II assembly *(LPA3) & original... 0.04 OrthoFinder output from all 47 species
Ehy_g15282 LPA3 protein involved in PS-II assembly *(LPA3) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01015969001 LPA3 Photosynthesis.photophosphorylation.photosystem... 0.03 OrthoFinder output from all 47 species
LOC_Os02g02520.1 LPA3, LOC_Os02g02520 LPA3 protein involved in PS-II assembly 0.03 OrthoFinder output from all 47 species
Len_g30874 LPA3 protein involved in PS-II assembly *(LPA3) & original... 0.06 OrthoFinder output from all 47 species
Ore_g06511 LPA3 protein involved in PS-II assembly *(LPA3) & original... 0.03 OrthoFinder output from all 47 species
Pir_g01323 LPA3 protein involved in PS-II assembly *(LPA3) & original... 0.03 OrthoFinder output from all 47 species
Pnu_g20972 LPA3 protein involved in PS-II assembly *(LPA3) & original... 0.03 OrthoFinder output from all 47 species
Ppi_g02119 LPA3 protein involved in PS-II assembly *(LPA3) & original... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0023.g008847 LPA3 protein involved in PS-II assembly *(LPA3) & original... 0.04 OrthoFinder output from all 47 species
Sam_g19564 No alias protein involved in PS-II assembly *(LPA3) & original... 0.04 OrthoFinder output from all 47 species
Smo166238 LPA3 Photosynthesis.photophosphorylation.photosystem... 0.02 OrthoFinder output from all 47 species
Solyc06g068480.3.1 LPA3, Solyc06g068480 LPA3 protein involved in PS-II assembly 0.04 OrthoFinder output from all 47 species
Spa_g01721 LPA3 protein involved in PS-II assembly *(LPA3) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e013465_P002 LPA3, Zm00001e013465 LPA3 protein involved in PS-II assembly 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003856 3-dehydroquinate synthase activity IEP HCCA
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009073 aromatic amino acid family biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR018962 DUF1995 95 357
No external refs found!