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  5. Dde_g09612

Dde_g09612


Description : pre-mRNA splicing factor *(RBM25) & original description: none


Gene families : OG0002875 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002875_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g09612

Target Alias Description ECC score Gene Family Method Actions
Adi_g086383 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g07363 No alias pre-mRNA splicing factor *(RBM25) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g56861 No alias pre-mRNA splicing factor *(RBM25) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g32231 No alias pre-mRNA splicing factor *(RBM25) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g58521 No alias pre-mRNA splicing factor *(RBM25) & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g39951 No alias pre-mRNA splicing factor *(RBM25) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g09989 No alias pre-mRNA splicing factor *(RBM25) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g31973 No alias pre-mRNA splicing factor *(RBM25) & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01020233001 No alias RNA processing.RNA splicing.U2-type-intron-specific... 0.03 OrthoFinder output from all 47 species
Mp4g16880.1 No alias pre-mRNA splicing factor (RBM25) 0.03 OrthoFinder output from all 47 species
Msp_g14073 No alias pre-mRNA splicing factor *(RBM25) & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g23928 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g09240 No alias pre-mRNA splicing factor *(RBM25) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g40329 No alias pre-mRNA splicing factor *(RBM25) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g18982 No alias pre-mRNA splicing factor *(RBM25) & original description: none 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR002483 PWI_dom 740 803
IPR000504 RRM_dom 66 135
No external refs found!