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  5. Lfl_g16582

Lfl_g16582 (REV1, ATREV1)


Aliases : REV1, ATREV1

Description : DNA polymerase *(REV1) & original description: none


Gene families : OG0005198 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005198_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g16582

Target Alias Description ECC score Gene Family Method Actions
Aev_g19717 REV1, ATREV1 DNA polymerase *(REV1) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g19611 REV1, ATREV1 DNA polymerase *(REV1) & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.1Z081200.1 REV1, ATREV1,... DNA polymerase *(REV1) & original description:... 0.04 OrthoFinder output from all 47 species
Gb_33413 REV1, ATREV1 DNA polymerase (REV1) 0.03 OrthoFinder output from all 47 species
MA_10429009g0010 REV1, ATREV1 DNA repair protein REV1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_10434560g0010 REV1, ATREV1 DNA repair protein REV1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Ppi_g18093 REV1, ATREV1 DNA polymerase *(REV1) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0015.g006707 REV1, ATREV1 DNA polymerase *(REV1) & original description: CDS=168-3257 0.03 OrthoFinder output from all 47 species
Zm00001e013098_P001 REV1, ATREV1,... DNA polymerase (REV1) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006281 DNA repair IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005730 nucleolus IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0017056 structural constituent of nuclear pore IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
MF GO:0030515 snoRNA binding IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
MF GO:0034511 U3 snoRNA binding IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
InterPro domains Description Start Stop
IPR017961 DNA_pol_Y-fam_little_finger 693 811
IPR001126 UmuC 461 605
IPR001357 BRCT_dom 155 242
No external refs found!