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  5. Dde_g07189

Dde_g07189 (DEF2, ATDEF2, PDF1B)


Aliases : DEF2, ATDEF2, PDF1B

Description : EC_3.5 hydrolase acting on carbon-nitrogen bond, other than peptide bond & original description: none


Gene families : OG0005303 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005303_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g07189
Cluster HCCA: Cluster_119

Target Alias Description ECC score Gene Family Method Actions
Adi_g031334 DEF2, ATDEF2, PDF1B EC_3.5 hydrolase acting on carbon-nitrogen bond, other... 0.03 OrthoFinder output from all 47 species
Als_g02994 DEF2, ATDEF2, PDF1B EC_3.5 hydrolase acting on carbon-nitrogen bond, other... 0.03 OrthoFinder output from all 47 species
Aob_g02982 DEF2, ATDEF2, PDF1B EC_3.5 hydrolase acting on carbon-nitrogen bond, other... 0.05 OrthoFinder output from all 47 species
Aspi01Gene02213.t1 DEF2, ATDEF2,... EC_3.5 hydrolase acting on carbon-nitrogen bond, other... 0.03 OrthoFinder output from all 47 species
Cba_g09544 DEF2, ATDEF2, PDF1B EC_3.5 hydrolase acting on carbon-nitrogen bond, other... 0.03 OrthoFinder output from all 47 species
Ceric.21G047700.1 DEF2, ATDEF2,... EC_3.5 hydrolase acting on carbon-nitrogen bond, other... 0.07 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000507.33 DEF2, ATDEF2, PDF1B Protein biosynthesis.organelle translation... 0.03 OrthoFinder output from all 47 species
Cre01.g039650 DEF2, ATDEF2, PDF1B Protein biosynthesis.organelle translation... 0.01 OrthoFinder output from all 47 species
Dcu_g20050 DEF2, ATDEF2, PDF1B EC_3.5 hydrolase acting on carbon-nitrogen bond, other... 0.06 OrthoFinder output from all 47 species
Ehy_g10092 DEF2, ATDEF2, PDF1B EC_3.5 hydrolase acting on carbon-nitrogen bond, other... 0.03 OrthoFinder output from all 47 species
GSVIVT01032450001 DEF2, ATDEF2, PDF1B Protein biosynthesis.organelle translation... 0.04 OrthoFinder output from all 47 species
LOC_Os01g44980.1 DEF2, ATDEF2,... formylmethionine deformylase (PDF) 0.02 OrthoFinder output from all 47 species
Lfl_g05284 DEF2, ATDEF2, PDF1B EC_3.5 hydrolase acting on carbon-nitrogen bond, other... 0.05 OrthoFinder output from all 47 species
MA_10434550g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g09546 DEF2, ATDEF2, PDF1B EC_3.5 hydrolase acting on carbon-nitrogen bond, other... 0.04 OrthoFinder output from all 47 species
Nbi_g29976 DEF2, ATDEF2, PDF1B EC_3.5 hydrolase acting on carbon-nitrogen bond, other... 0.04 OrthoFinder output from all 47 species
Ore_g20350 DEF2, ATDEF2, PDF1B EC_3.5 hydrolase acting on carbon-nitrogen bond, other... 0.03 OrthoFinder output from all 47 species
Pir_g12840 DEF2, ATDEF2, PDF1B EC_3.5 hydrolase acting on carbon-nitrogen bond, other... 0.05 OrthoFinder output from all 47 species
Pnu_g06375 DEF2, ATDEF2, PDF1B EC_3.5 hydrolase acting on carbon-nitrogen bond, other... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0051.g013940 DEF2, ATDEF2, PDF1B EC_3.5 hydrolase acting on carbon-nitrogen bond, other... 0.05 OrthoFinder output from all 47 species
Sam_g28123 No alias EC_3.5 hydrolase acting on carbon-nitrogen bond, other... 0.07 OrthoFinder output from all 47 species
Solyc02g086680.4.1 DEF2, ATDEF2,... formylmethionine deformylase (PDF) 0.02 OrthoFinder output from all 47 species
Spa_g00688 DEF2, ATDEF2, PDF1B EC_3.5 hydrolase acting on carbon-nitrogen bond, other... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0042586 peptide deformylase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004177 aminopeptidase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0004602 glutathione peroxidase activity IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0008113 peptide-methionine (S)-S-oxide reductase activity IEP HCCA
MF GO:0008235 metalloexopeptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0070006 metalloaminopeptidase activity IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
InterPro domains Description Start Stop
IPR023635 Peptide_deformylase 103 250
No external refs found!