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  5. Dde_g07008

Dde_g07008


Description : not classified & original description: none


Gene families : OG0003321 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003321_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g07008

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00086p00132870 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
AT3G47890 No alias Ubiquitin carboxyl-terminal hydrolase-related protein 0.09 OrthoFinder output from all 47 species
AT3G47910 No alias Ubiquitin carboxyl-terminal hydrolase-related protein 0.11 OrthoFinder output from all 47 species
Adi_g080721 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g14795 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g04590 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g18753 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Als_g32535 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g22460 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene09610.t1 Aspi01Gene09610 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0327.g065237 No alias not classified & original description: CDS=1-5397 0.06 OrthoFinder output from all 47 species
Ceric.1Z194000.1 Ceric.1Z194000 not classified & original description: pacid=50618972... 0.06 OrthoFinder output from all 47 species
Cre12.g508250 No alias No description available 0.05 OrthoFinder output from all 47 species
Dcu_g04153 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g16619 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
GSVIVT01008079001 No alias No description available 0.09 OrthoFinder output from all 47 species
LOC_Os03g06950.1 LOC_Os03g06950 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Len_g49533 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g12618 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
MA_46922g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Nbi_g05015 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g02488 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g13760 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Solyc03g113370.3.1 Solyc03g113370 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc06g071120.3.1 Solyc06g071120 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Spa_g25851 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g02198 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e039017_P003 Zm00001e039017 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004843 cysteine-type deubiquitinase activity IEA Interproscan
BP GO:0016579 protein deubiquitination IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004176 ATP-dependent peptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR006866 DUF627_N 98 204
IPR001394 Peptidase_C19_UCH 1461 1789
IPR006865 DUF629 364 910
No external refs found!