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  5. Dde_g05955

Dde_g05955


Description : scaffold component *(Sec31) of coat protein complex & original description: none


Gene families : OG0003227 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003227_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g05955

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00111p00143180 evm_27.TU.AmTr_v1... Vesicle trafficking.Coat protein II (COPII) coatomer... 0.02 OrthoFinder output from all 47 species
AMTR_s00111p00143660 evm_27.TU.AmTr_v1... Vesicle trafficking.Coat protein II (COPII) coatomer... 0.04 OrthoFinder output from all 47 species
AT3G63460 No alias transducin family protein / WD-40 repeat family protein 0.03 OrthoFinder output from all 47 species
Adi_g011557 No alias scaffold component *(Sec31) of coat protein complex &... 0.02 OrthoFinder output from all 47 species
Adi_g057724 No alias scaffold component *(Sec31) of coat protein complex &... 0.04 OrthoFinder output from all 47 species
Aev_g07314 No alias scaffold component *(Sec31) of coat protein complex &... 0.03 OrthoFinder output from all 47 species
Ala_g22457 No alias scaffold component *(Sec31) of coat protein complex &... 0.03 OrthoFinder output from all 47 species
Als_g30686 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g62026 No alias scaffold component *(Sec31) of coat protein complex &... 0.02 OrthoFinder output from all 47 species
Aob_g15456 No alias scaffold component *(Sec31) of coat protein complex &... 0.02 OrthoFinder output from all 47 species
Aop_g12879 No alias scaffold component *(Sec31) of coat protein complex &... 0.04 OrthoFinder output from all 47 species
Aspi01Gene62777.t1 Aspi01Gene62777 scaffold component *(Sec31) of coat protein complex &... 0.03 OrthoFinder output from all 47 species
Azfi_s0231.g059267 No alias scaffold component *(Sec31) of coat protein complex &... 0.03 OrthoFinder output from all 47 species
Cba_g13907 No alias scaffold component *(Sec31) of coat protein complex &... 0.03 OrthoFinder output from all 47 species
Ceric.02G027200.1 Ceric.02G027200 scaffold component *(Sec31) of coat protein complex &... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001154.3 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001154.4 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.03 OrthoFinder output from all 47 species
Cre12.g522450 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.01 OrthoFinder output from all 47 species
Dcu_g03156 No alias scaffold component *(Sec31) of coat protein complex &... 0.04 OrthoFinder output from all 47 species
GSVIVT01001441001 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.05 OrthoFinder output from all 47 species
Gb_38895 No alias scaffolding component Sec31 of coat protein complex 0.06 OrthoFinder output from all 47 species
LOC_Os07g46370.1 LOC_Os07g46370 scaffolding component Sec31 of coat protein complex 0.01 OrthoFinder output from all 47 species
Len_g13782 No alias scaffold component *(Sec31) of coat protein complex &... 0.04 OrthoFinder output from all 47 species
Lfl_g04962 No alias scaffold component *(Sec31) of coat protein complex &... 0.03 OrthoFinder output from all 47 species
MA_57417g0010 No alias scaffolding component Sec31 of coat protein complex 0.02 OrthoFinder output from all 47 species
Nbi_g04454 No alias scaffold component *(Sec31) of coat protein complex &... 0.05 OrthoFinder output from all 47 species
Ore_g26748 No alias scaffold component *(Sec31) of coat protein complex &... 0.03 OrthoFinder output from all 47 species
Ore_g43593 No alias scaffold component *(Sec31) of coat protein complex &... 0.03 OrthoFinder output from all 47 species
Pir_g13045 No alias scaffold component *(Sec31) of coat protein complex &... 0.04 OrthoFinder output from all 47 species
Ppi_g32771 No alias scaffold component *(Sec31) of coat protein complex &... 0.04 OrthoFinder output from all 47 species
Smo230767 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.05 OrthoFinder output from all 47 species
Solyc01g088020.3.1 Solyc01g088020 scaffolding component Sec31 of coat protein complex 0.03 OrthoFinder output from all 47 species
Zm00001e010894_P003 Zm00001e010894 scaffolding component Sec31 of coat protein complex 0.03 OrthoFinder output from all 47 species
Zm00001e035747_P003 Zm00001e035747 scaffolding component Sec31 of coat protein complex 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
BP GO:0000381 regulation of alternative mRNA splicing, via spliceosome IEP HCCA
BP GO:0001510 RNA methylation IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP HCCA
MF GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP HCCA
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006528 asparagine metabolic process IEP HCCA
BP GO:0006529 asparagine biosynthetic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
BP GO:0009067 aspartate family amino acid biosynthetic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
BP GO:0016556 mRNA modification IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030118 clathrin coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030125 clathrin vesicle coat IEP HCCA
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP HCCA
CC GO:0030132 clathrin coat of coated pit IEP HCCA
BP GO:0032259 methylation IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0043484 regulation of RNA splicing IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0048024 regulation of mRNA splicing, via spliceosome IEP HCCA
BP GO:0050684 regulation of mRNA processing IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0080009 mRNA methylation IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
BP GO:1903311 regulation of mRNA metabolic process IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR024298 ACE1_Sec16_Sec31 580 771
IPR001680 WD40_repeat 118 153
No external refs found!