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  5. Dde_g05769

Dde_g05769 (HRB1)


Aliases : HRB1

Description : C2H2 subclass Di19 transcription factor & original description: none


Gene families : OG0000852 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000852_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g05769
Cluster HCCA: Cluster_115

Target Alias Description ECC score Gene Family Method Actions
AT1G56280 DI19, ATDI19 drought-induced 19 0.02 OrthoFinder output from all 47 species
Ceric.32G011600.1 HRB1, Ceric.32G011600 C2H2 subclass Di19 transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ehy_g06363 No alias C2H2 subclass Di19 transcription factor & original... 0.02 OrthoFinder output from all 47 species
LOC_Os05g48800.2 LOC_Os05g48800 Protein DEHYDRATION-INDUCED 19 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
Lfl_g10230 No alias C2H2 subclass Di19 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Nbi_g04122 HRB1 C2H2 subclass Di19 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0113.g020822 No alias C2H2 subclass Di19 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Spa_g07297 HRB1 C2H2 subclass Di19 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Spa_g09720 No alias C2H2 subclass Di19 transcription factor & original... 0.02 OrthoFinder output from all 47 species
Zm00001e031458_P003 Zm00001e031458 Protein DEHYDRATION-INDUCED 19 homolog 2 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Zm00001e032417_P003 HRB1, Zm00001e032417 Protein DEHYDRATION-INDUCED 19 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000966 RNA 5'-end processing IEP HCCA
BP GO:0001682 tRNA 5'-leader removal IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
CC GO:0030677 ribonuclease P complex IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0099116 tRNA 5'-end processing IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1902555 endoribonuclease complex IEP HCCA
CC GO:1905348 endonuclease complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR027935 Di19_C 114 222
IPR008598 Di19_Zn-bd 40 92
No external refs found!