Dde_g04918

Description : not classified & original description: none

Gene families : OG0004721 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004721_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Dde_g04918
Cluster	HCCA: Cluster_119

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00016p00242110	evm_27.TU.AmTr_v1...	ATP-dependent DNA helicase At3g02060, chloroplastic...	0.03	OrthoFinder output from all 47 species
Aev_g07951	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Ala_g17279	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aop_g22379	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene60597.t1	Aspi01Gene60597	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Azfi_s0257.g060601	No alias	not classified & original description: CDS=200-3178	0.03	OrthoFinder output from all 47 species
Ceric.13G022800.1	Ceric.13G022800	not classified & original description: pacid=50636376...	0.04	OrthoFinder output from all 47 species
Dac_g42486	No alias	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Ehy_g08581	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Gb_38755	No alias	ATP-dependent DNA helicase At3g02060, chloroplastic...	0.04	OrthoFinder output from all 47 species
LOC_Os11g32880.1	LOC_Os11g32880	ATP-dependent DNA helicase At3g02060, chloroplastic...	0.02	OrthoFinder output from all 47 species
Lfl_g05693	No alias	not classified & original description: none	0.06	OrthoFinder output from all 47 species
MA_10436969g0010	No alias	ATP-dependent DNA helicase At3g02060, chloroplastic...	0.04	OrthoFinder output from all 47 species
MA_9353463g0010	No alias	ATP-dependent DNA helicase At3g02060, chloroplastic...	0.03	OrthoFinder output from all 47 species
Mp2g07230.1	No alias	ATP-dependent DNA helicase At3g02060, chloroplastic...	0.03	OrthoFinder output from all 47 species
Nbi_g10930	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0015.g006439	No alias	not classified & original description: CDS=315-2762	0.03	OrthoFinder output from all 47 species
Smo77276	No alias	ATP-dependent DNA helicase At3g02060, chloroplastic...	0.05	OrthoFinder output from all 47 species
Spa_g26930	No alias	not classified & original description: none	0.06	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	HCCA
MF	GO:0008942	nitrite reductase [NAD(P)H] activity	IEP	HCCA
MF	GO:0009916	alternative oxidase activity	IEP	HCCA
BP	GO:0010207	photosystem II assembly	IEP	HCCA
BP	GO:0015979	photosynthesis	IEP	HCCA
MF	GO:0016661	oxidoreductase activity, acting on other nitrogenous compounds as donors	IEP	HCCA
MF	GO:0016679	oxidoreductase activity, acting on diphenols and related substances as donors	IEP	HCCA
MF	GO:0016682	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor	IEP	HCCA
MF	GO:0016859	cis-trans isomerase activity	IEP	HCCA
BP	GO:0043933	protein-containing complex organization	IEP	HCCA
MF	GO:0046857	oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor	IEP	HCCA
BP	GO:0065003	protein-containing complex assembly	IEP	HCCA
MF	GO:0098809	nitrite reductase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR011545	DEAD/DEAH_box_helicase_dom	347	484
IPR001650	Helicase_C	532	631
IPR003711	CarD-like/TRCF_RID	201	296

External Links

No external refs found!

Dde_g04918

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation