Dde_g04451 (Tudor1, AtTudor1, TSN1)


Aliases : Tudor1, AtTudor1, TSN1

Description : mRNA endoribonuclease *(TSN) & original description: none


Gene families : OG0004117 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004117_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g04451

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00246090 Tudor1,... RNA processing.messenger ribonucleoprotein particle... 0.06 OrthoFinder output from all 47 species
AT5G07350 Tudor1, AtTudor1, TSN1 TUDOR-SN protein 1 0.02 OrthoFinder output from all 47 species
AT5G61780 TSN2, Tudor2, AtTudor2 TUDOR-SN protein 2 0.05 OrthoFinder output from all 47 species
Aob_g18577 Tudor1, AtTudor1, TSN1 mRNA endoribonuclease *(TSN) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0022.g016015 Tudor1, AtTudor1, TSN1 mRNA endoribonuclease *(TSN) & original description: CDS=1-3189 0.04 OrthoFinder output from all 47 species
Cba_g22914 Tudor1, AtTudor1, TSN1 mRNA endoribonuclease *(TSN) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01032946001 Tudor1, AtTudor1, TSN1 RNA processing.messenger ribonucleoprotein particle... 0.02 OrthoFinder output from all 47 species
Pnu_g08514 Tudor1, AtTudor1, TSN1 mRNA endoribonuclease *(TSN) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
InterPro domains Description Start Stop
IPR002999 Tudor 742 858
IPR016071 Staphylococal_nuclease_OB-fold 35 143
IPR016071 Staphylococal_nuclease_OB-fold 863 974
IPR016071 Staphylococal_nuclease_OB-fold 268 361
IPR016071 Staphylococal_nuclease_OB-fold 622 720
No external refs found!