Aliases : ATSIG1, SIGB, ATSIG2, ABC1, SIG2, SIGA, SIG1
Description : basal Sigma-type transcription factor & original description: none
Gene families : OG0000565 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000565_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT1G08540 | ATSIG1, SIGB,... | RNApolymerase sigma subunit 2 | 0.02 | OrthoFinder output from all 47 species | |
AT2G36990 | SIGF, SIG6,... | RNApolymerase sigma-subunit F | 0.02 | OrthoFinder output from all 47 species | |
Adi_g022157 | ATSIG1, SIGB,... | basal Sigma-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
Als_g16248 | SIGB, SIG2,... | basal Sigma-type transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
Cba_g08708 | ATSIG1, SIGB,... | basal Sigma-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.04G088100.1 | Ceric.04G088100 | not classified & original description: pacid=50632264... | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os05g51150.1 | SIGC, SIG3,... | basal transcription factor (Sigma) | 0.02 | OrthoFinder output from all 47 species | |
Len_g00672 | ATSIG1, SIGB,... | basal Sigma-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
MA_10429585g0010 | ATSIG1, SIGB,... | basal transcription factor (Sigma) | 0.02 | OrthoFinder output from all 47 species | |
Mp4g13380.1 | ATSIG1, SIGB,... | basal transcription factor (Sigma) | 0.02 | OrthoFinder output from all 47 species | |
Nbi_g09780 | ATSIG1, SIGB,... | basal Sigma-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
Nbi_g17161 | SIGB, SIG2,... | basal Sigma-type transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g06448 | ATSIG1, SIGB,... | basal Sigma-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g30557 | SIGB, SIG2,... | basal Sigma-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0055.g014443 | SIGB, SIG2,... | basal Sigma-type transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
Sam_g38609 | No alias | basal Sigma-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
Solyc01g081490.3.1 | ATSIG1, SIGB,... | basal transcription factor (Sigma) | 0.02 | OrthoFinder output from all 47 species | |
Solyc03g097320.3.1 | SIGB, SIG2,... | basal transcription factor (Sigma) | 0.04 | OrthoFinder output from all 47 species | |
Solyc08g065970.3.1 | SIGC, SIG3,... | basal transcription factor (Sigma) | 0.04 | OrthoFinder output from all 47 species | |
Solyc09g008040.3.1 | SIGF, SIG6,... | basal transcription factor (Sigma) | 0.03 | OrthoFinder output from all 47 species | |
Tin_g12918 | ATSIG1, SIGB,... | basal Sigma-type transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e021420_P001 | ATSIG1, SIGB,... | basal transcription factor (Sigma) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e032586_P001 | SIGC, SIG3,... | basal transcription factor (Sigma) | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003700 | DNA-binding transcription factor activity | IEA | Interproscan |
BP | GO:0006352 | DNA-templated transcription initiation | IEA | Interproscan |
BP | GO:0006355 | regulation of DNA-templated transcription | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
No external refs found! |