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Aliases : CRR22
Description : not classified & original description: none
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00019p00110050 | evm_27.TU.AmTr_v1... | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g19304 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g05294 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g36268 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g02020 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g09708 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g11871 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g26873 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g68048 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0035.g025669 | No alias | not classified & original description: CDS=1-1770 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0062.g035166 | No alias | not classified & original description: CDS=1-3372 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0349.g066478 | OTP84 | not classified & original description: CDS=1-2082 | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g75238 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.03G039400.1 | Ceric.03G039400 | not classified & original description: pacid=50571919... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.10G077700.1 | Ceric.10G077700 | not classified & original description: pacid=50611965... | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.18G001000.1 | Ceric.18G001000 | not classified & original description: pacid=50621627... | 0.03 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00001038.5 | No alias | No description available | 0.01 | OrthoFinder output from all 47 species | |
| Dac_g05763 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g09346 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g14137 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g18775 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g19071 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g19103 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g21354 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g22073 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g25283 | CRR22 | ssDNA-binding protein *(OSB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g27713 | OTP86 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g33093 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g35222 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01012461001 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01029254001 | OSB4 | RNA biosynthesis.organelle machineries.RNA polymerase... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01033004001 | No alias | Pentatricopeptide repeat-containing protein At3g26782,... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_08036 | EMB2261 | Pentatricopeptide repeat-containing protein At2g27610... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_18263 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_19693 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_20571 | No alias | Pentatricopeptide repeat-containing protein At2g13600... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_23267 | No alias | Pentatricopeptide repeat-containing protein At2g22070... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_25283 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_35599 | No alias | Pentatricopeptide repeat-containing protein At2g22070... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_40766 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.04 | OrthoFinder output from all 47 species | |
| Len_g01885 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g34215 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g48923 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g07805 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Nbi_g09669 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g27639 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g27846 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g16678 | REME1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g02826 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g03104 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g03105 | OTP86 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g03395 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g11351 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g11403 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g13334 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g13538 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g17821 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g35608 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g46650 | OTP84 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g57077 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g60793 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g61524 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g63395 | OTP86 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g63397 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g63498 | EMB2758 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g63597 | REME1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g63642 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g63654 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g63899 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g64859 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ppi_g53364 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g54615 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g63082 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0006.g003208 | No alias | monogalactosyldiacylglycerol lipase *(HIL1) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0007.g003613 | No alias | not classified & original description: CDS=279-3914 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0043.g012882 | No alias | not classified & original description: CDS=1-2733 | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0073.g017091 | No alias | not classified & original description: CDS=1-3111 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0080.g017928 | No alias | not classified & original description: CDS=112-2919 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0140.g022672 | No alias | not classified & original description: CDS=1-3558 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g11900 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g51263 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g01728 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g08093 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g14147 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g14331 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g14979 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g16047 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g16206 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g20031 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g20095 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g23138 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g23793 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g23959 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g28143 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g33277 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g45659 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g54147 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g05622 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g10198 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g10541 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g23116 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g27746 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g38392 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e032679_P001 | Zm00001e032679 | RNA editing factor (OTP80) | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003747 | translation release factor activity | IEP | HCCA |
| BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
| BP | GO:0006400 | tRNA modification | IEP | HCCA |
| BP | GO:0006415 | translational termination | IEP | HCCA |
| BP | GO:0006457 | protein folding | IEP | HCCA |
| BP | GO:0008033 | tRNA processing | IEP | HCCA |
| MF | GO:0008079 | translation termination factor activity | IEP | HCCA |
| MF | GO:0008135 | translation factor activity, RNA binding | IEP | HCCA |
| MF | GO:0008173 | RNA methyltransferase activity | IEP | HCCA |
| MF | GO:0008175 | tRNA methyltransferase activity | IEP | HCCA |
| MF | GO:0008176 | tRNA (guanine-N7-)-methyltransferase activity | IEP | HCCA |
| MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | HCCA |
| BP | GO:0009451 | RNA modification | IEP | HCCA |
| MF | GO:0016423 | tRNA (guanine) methyltransferase activity | IEP | HCCA |
| MF | GO:0016667 | oxidoreductase activity, acting on a sulfur group of donors | IEP | HCCA |
| MF | GO:0016670 | oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor | IEP | HCCA |
| MF | GO:0016972 | thiol oxidase activity | IEP | HCCA |
| BP | GO:0022411 | cellular component disassembly | IEP | HCCA |
| BP | GO:0032984 | protein-containing complex disassembly | IEP | HCCA |
| BP | GO:0034470 | ncRNA processing | IEP | HCCA |
| BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
| BP | GO:0043933 | protein-containing complex organization | IEP | HCCA |
| MF | GO:0045182 | translation regulator activity | IEP | HCCA |
| MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | HCCA |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 11 | 41 |
| IPR002885 | Pentatricopeptide_repeat | 152 | 175 |
| IPR002885 | Pentatricopeptide_repeat | 356 | 380 |
| IPR002885 | Pentatricopeptide_repeat | 382 | 429 |
| IPR002885 | Pentatricopeptide_repeat | 280 | 327 |
| IPR002885 | Pentatricopeptide_repeat | 76 | 122 |
| IPR002885 | Pentatricopeptide_repeat | 177 | 224 |
| No external refs found! |