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  5. Dde_g02049

Dde_g02049


Description : regulatory protein *(TVA) of cellulose synthase complex trafficking & original description: none


Gene families : OG0001095 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001095_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g02049
Cluster HCCA: Cluster_146

Target Alias Description ECC score Gene Family Method Actions
AT1G52910 No alias Protein of unknown function (DUF1218) 0.03 OrthoFinder output from all 47 species
AT1G68220 No alias Protein of unknown function (DUF1218) 0.04 OrthoFinder output from all 47 species
Cba_g06259 No alias regulatory protein *(TVA) of cellulose synthase complex... 0.03 OrthoFinder output from all 47 species
GSVIVT01011894001 No alias No description available 0.02 OrthoFinder output from all 47 species
Gb_40822 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os07g27810.1 LOC_Os07g27810 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os09g10910.3 LOC_Os09g10910 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Lfl_g05912 No alias regulatory protein *(TVA) of cellulose synthase complex... 0.02 OrthoFinder output from all 47 species
Ore_g20570 No alias regulatory protein *(TVA) of cellulose synthase complex... 0.01 OrthoFinder output from all 47 species
Sam_g25817 No alias regulatory protein *(TVA) of cellulose synthase complex... 0.02 OrthoFinder output from all 47 species
Sam_g39815 No alias regulatory protein *(TVA) of cellulose synthase complex... 0.02 OrthoFinder output from all 47 species
Solyc12g013650.2.1 Solyc12g013650 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e009524_P001 Zm00001e009524 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
InterPro domains Description Start Stop
IPR009606 DEAL/Modifying_wall_lignin1/2 60 155
No external refs found!