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  5. Dde_g01633

Dde_g01633


Description : RNA helicase *(SMA1) & original description: none


Gene families : OG0002793 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002793_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g01633

Target Alias Description ECC score Gene Family Method Actions
Cba_g12474 No alias RNA helicase *(SMA1) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.22G074000.1 Ceric.22G074000 RNA helicase *(SMA1) & original description:... 0.03 OrthoFinder output from all 47 species
LOC_Os03g50090.2 LOC_Os03g50090 RNA helicase (Prp28) 0.03 OrthoFinder output from all 47 species
MA_90357g0010 No alias DEAD-box ATP-dependent RNA helicase 21 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Nbi_g06235 No alias RNA helicase *(SMA1) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g27252 No alias RNA helicase *(SMA1) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g32975 No alias RNA helicase *(SMA1) & original description: none 0.02 OrthoFinder output from all 47 species
Smo165735 No alias RNA processing.RNA splicing.spliceosome... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003872 6-phosphofructokinase activity IEP HCCA
MF GO:0004655 porphobilinogen synthase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007030 Golgi organization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008443 phosphofructokinase activity IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0019200 carbohydrate kinase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001650 Helicase_C 547 656
IPR011545 DEAD/DEAH_box_helicase_dom 323 513
No external refs found!