Aliases : AtRABG3d, RABG3d
Description : G-class RAB GTPase & original description: none
Gene families : OG0000865 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000865_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Dde_g01198 | |
Cluster | HCCA: Cluster_20 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Aop_g09532 | AtRABG3d, RABG3d | G-class RAB GTPase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Dcu_g26801 | AtRABG3d, RABG3d | G-class RAB GTPase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os05g44050.1 | ATRAB7B, RAB7B,... | G-class RAB GTPase | 0.02 | OrthoFinder output from all 47 species | |
Ore_g07967 | AtRABG3d, RABG3d | G-class RAB GTPase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0287.g027148 | ATRABG3C, ATRAB7D, RABG3c | G-class RAB GTPase & original description: CDS=209-802 | 0.03 | OrthoFinder output from all 47 species | |
Sam_g07442 | No alias | G-class RAB GTPase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Solyc01g109520.3.1 | ATRAB7B, RAB7B,... | G-class RAB GTPase | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003924 | GTPase activity | IEA | Interproscan |
MF | GO:0005525 | GTP binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | HCCA |
BP | GO:0006066 | alcohol metabolic process | IEP | HCCA |
BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | HCCA |
BP | GO:0008152 | metabolic process | IEP | HCCA |
BP | GO:0009056 | catabolic process | IEP | HCCA |
BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
BP | GO:0016311 | dephosphorylation | IEP | HCCA |
MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | HCCA |
BP | GO:0019637 | organophosphate metabolic process | IEP | HCCA |
BP | GO:0019751 | polyol metabolic process | IEP | HCCA |
MF | GO:0019842 | vitamin binding | IEP | HCCA |
BP | GO:0019941 | modification-dependent protein catabolic process | IEP | HCCA |
MF | GO:0030170 | pyridoxal phosphate binding | IEP | HCCA |
BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | HCCA |
BP | GO:0043647 | inositol phosphate metabolic process | IEP | HCCA |
BP | GO:0044248 | cellular catabolic process | IEP | HCCA |
BP | GO:0044262 | cellular carbohydrate metabolic process | IEP | HCCA |
BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
BP | GO:0044282 | small molecule catabolic process | IEP | HCCA |
BP | GO:0046164 | alcohol catabolic process | IEP | HCCA |
BP | GO:0046174 | polyol catabolic process | IEP | HCCA |
BP | GO:0046434 | organophosphate catabolic process | IEP | HCCA |
BP | GO:0046838 | phosphorylated carbohydrate dephosphorylation | IEP | HCCA |
BP | GO:0046855 | inositol phosphate dephosphorylation | IEP | HCCA |
BP | GO:0051603 | proteolysis involved in protein catabolic process | IEP | HCCA |
MF | GO:0070279 | vitamin B6 binding | IEP | HCCA |
BP | GO:0071545 | inositol phosphate catabolic process | IEP | HCCA |
BP | GO:1901575 | organic substance catabolic process | IEP | HCCA |
BP | GO:1901615 | organic hydroxy compound metabolic process | IEP | HCCA |
BP | GO:1901616 | organic hydroxy compound catabolic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001806 | Small_GTPase | 10 | 177 |
No external refs found! |