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  5. Dde_g00630

Dde_g00630


Description : stress granule assembly factor *(UBP1) & original description: none


Gene families : OG0002014 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002014_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g00630
Cluster HCCA: Cluster_185

Target Alias Description ECC score Gene Family Method Actions
Aop_g65747 UBP1B stress granule assembly factor *(UBP1) & original... 0.04 OrthoFinder output from all 47 species
Azfi_s0743.g084783 UBP1B stress granule assembly factor *(UBP1) & original... 0.02 OrthoFinder output from all 47 species
Ceric.24G074900.1 Ceric.24G074900 stress granule assembly factor *(UBP1) & original... 0.04 OrthoFinder output from all 47 species
Dac_g12033 UBP1B stress granule assembly factor *(UBP1) & original... 0.04 OrthoFinder output from all 47 species
LOC_Os07g42380.1 LOC_Os07g42380 mRNA-binding regulatory factor (UBP1) 0.02 OrthoFinder output from all 47 species
Msp_g16815 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g19745 UBP1B stress granule assembly factor *(UBP1) & original... 0.03 OrthoFinder output from all 47 species
Pir_g61152 UBP1B stress granule assembly factor *(UBP1) & original... 0.04 OrthoFinder output from all 47 species
Sam_g14776 No alias stress granule assembly factor *(UBP1) & original... 0.03 OrthoFinder output from all 47 species
Tin_g28148 UBP1B stress granule assembly factor *(UBP1) & original... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0010257 NADH dehydrogenase complex assembly IEP HCCA
BP GO:0010258 NADH dehydrogenase complex (plastoquinone) assembly IEP HCCA
BP GO:0010275 NAD(P)H dehydrogenase complex assembly IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
MF GO:0032977 membrane insertase activity IEP HCCA
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140597 protein carrier chaperone IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 431 496
IPR000504 RRM_dom 330 400
IPR000504 RRM_dom 245 310
No external refs found!