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  5. Dde_g00341

Dde_g00341 (PSBR)


Aliases : PSBR

Description : component *(PsbR) of PS-II complex & original description: none


Gene families : OG0002211 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002211_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g00341

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00092p00162140 PSBR,... Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.02 OrthoFinder output from all 47 species
AT1G79040 PSBR photosystem II subunit R 0.1 OrthoFinder output from all 47 species
Adi_g011483 PSBR component *(PsbR) of PS-II complex & original description: none 0.08 OrthoFinder output from all 47 species
Aev_g13057 PSBR component *(PsbR) of PS-II complex & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g04077 PSBR component *(PsbR) of PS-II complex & original description: none 0.09 OrthoFinder output from all 47 species
Als_g05205 PSBR component *(PsbR) of PS-II complex & original description: none 0.09 OrthoFinder output from all 47 species
Aob_g00417 PSBR component *(PsbR) of PS-II complex & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g12987 PSBR component *(PsbR) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27127 PSBR component *(PsbR) of PS-II complex & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g29630 PSBR component *(PsbR) of PS-II complex & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g02302 PSBR component *(PsbR) of PS-II complex & original description: none 0.07 OrthoFinder output from all 47 species
Cba_g30771 PSBR component *(PsbR) of PS-II complex & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.20G086200.1 PSBR, Ceric.20G086200 component *(PsbR) of PS-II complex & original... 0.09 OrthoFinder output from all 47 species
Cre06.g261000 PSBR Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.09 OrthoFinder output from all 47 species
Dac_g12213 PSBR component *(PsbR) of PS-II complex & original description: none 0.09 OrthoFinder output from all 47 species
Dac_g32722 PSBR component *(PsbR) of PS-II complex & original description: none 0.09 OrthoFinder output from all 47 species
Dcu_g25420 PSBR component *(PsbR) of PS-II complex & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g28297 PSBR component *(PsbR) of PS-II complex & original description: none 0.13 OrthoFinder output from all 47 species
Ehy_g22404 PSBR component *(PsbR) of PS-II complex & original description: none 0.04 OrthoFinder output from all 47 species
Gb_04149 PSBR component PsbR of PS-II complex 0.09 OrthoFinder output from all 47 species
LOC_Os08g10020.1 PSBR, LOC_Os08g10020 component PsbR of PS-II complex 0.06 OrthoFinder output from all 47 species
Len_g00088 PSBR component *(PsbR) of PS-II complex & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g38512 PSBR component *(PsbR) of PS-II complex & original description: none 0.04 OrthoFinder output from all 47 species
MA_282g0010 PSBR component PsbR of PS-II complex 0.08 OrthoFinder output from all 47 species
Mp3g05840.1 PSBR component PsbR of PS-II complex 0.07 OrthoFinder output from all 47 species
Msp_g02196 PSBR component *(PsbR) of PS-II complex & original description: none 0.08 OrthoFinder output from all 47 species
Nbi_g40620 PSBR component *(PsbR) of PS-II complex & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g06143 PSBR component *(PsbR) of PS-II complex & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g06144 PSBR component *(PsbR) of PS-II complex & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g25679 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g09918 PSBR component *(PsbR) of PS-II complex & original description: none 0.06 OrthoFinder output from all 47 species
Pnu_g31183 PSBR component *(PsbR) of PS-II complex & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c16_5650V3.1 PSBR, Pp3c16_5650 photosystem II subunit R 0.05 OrthoFinder output from all 47 species
Pp3c27_2340V3.1 PSBR, Pp3c27_2340 photosystem II subunit R 0.02 OrthoFinder output from all 47 species
Ppi_g01588 PSBR component *(PsbR) of PS-II complex & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g12793 PSBR component *(PsbR) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g27322 PSBR component *(PsbR) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g27323 PSBR component *(PsbR) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0170.g024344 PSBR component *(PsbR) of PS-II complex & original... 0.08 OrthoFinder output from all 47 species
Sam_g12723 No alias component *(PsbR) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Solyc07g066310.3.1 PSBR, Solyc07g066310 component PsbR of PS-II complex 0.09 OrthoFinder output from all 47 species
Spa_g03368 PSBR component *(PsbR) of PS-II complex & original description: none 0.12 OrthoFinder output from all 47 species
Tin_g07988 PSBR component *(PsbR) of PS-II complex & original description: none 0.08 OrthoFinder output from all 47 species
Zm00001e021601_P001 PSBR, Zm00001e021601 component PsbR of PS-II complex 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0009523 photosystem II IEA Interproscan
CC GO:0009654 photosystem II oxygen evolving complex IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
CC GO:0042651 thylakoid membrane IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006457 protein folding IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009536 plastid IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
MF GO:0030145 manganese ion binding IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR006814 PSII_PsbR 50 147
No external refs found!