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  5. Dde_g00160

Dde_g00160 (GDC1)


Aliases : GDC1

Description : SRP insertion system TIC-to-SRP handover factor *(LTD) & original description: none


Gene families : OG0006316 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006316_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Dde_g00160
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00062p00076280 GDC1,... Protein LHCP TRANSLOCATION DEFECT OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
AT1G50900 GDC1 Ankyrin repeat family protein 0.06 OrthoFinder output from all 47 species
Aev_g12435 GDC1 SRP insertion system TIC-to-SRP handover factor *(LTD) &... 0.04 OrthoFinder output from all 47 species
Als_g02742 GDC1 SRP insertion system TIC-to-SRP handover factor *(LTD) &... 0.03 OrthoFinder output from all 47 species
Aob_g00497 GDC1 SRP insertion system TIC-to-SRP handover factor *(LTD) &... 0.05 OrthoFinder output from all 47 species
Azfi_s0034.g025338 GDC1 SRP insertion system TIC-to-SRP handover factor *(LTD) &... 0.04 OrthoFinder output from all 47 species
Dac_g00424 GDC1 SRP insertion system TIC-to-SRP handover factor *(LTD) &... 0.04 OrthoFinder output from all 47 species
Dcu_g05121 GDC1 SRP insertion system TIC-to-SRP handover factor *(LTD) &... 0.03 OrthoFinder output from all 47 species
GSVIVT01002001001 GDC1 Protein LHCP TRANSLOCATION DEFECT OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os07g33660.1 GDC1, LOC_Os07g33660 SRP insertion system TIC-to-SRP handover factor (LTD) 0.02 OrthoFinder output from all 47 species
Len_g02031 GDC1 SRP insertion system TIC-to-SRP handover factor *(LTD) &... 0.04 OrthoFinder output from all 47 species
Mp3g06400.1 GDC1 SRP insertion system TIC-to-SRP handover factor (LTD) 0.06 OrthoFinder output from all 47 species
Ppi_g04901 GDC1 SRP insertion system TIC-to-SRP handover factor *(LTD) &... 0.05 OrthoFinder output from all 47 species
Sam_g23702 No alias SRP insertion system TIC-to-SRP handover factor *(LTD) &... 0.05 OrthoFinder output from all 47 species
Spa_g51015 GDC1 SRP insertion system TIC-to-SRP handover factor *(LTD) &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0004602 glutathione peroxidase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
BP GO:0017038 protein import IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!