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  5. Aop_g70469

Aop_g70469


Description : histone demethylase *(KDM3) & original description: none


Gene families : OG0000328 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000328_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g70469
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00058780 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.JUMONJI... 0.05 OrthoFinder output from all 47 species
Adi_g020057 No alias histone demethylase *(KDM3) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g059802 No alias histone demethylase *(KDM3) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g086369 No alias histone demethylase *(KDM3) & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g109477 No alias histone demethylase *(KDM3) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g113607 No alias histone demethylase *(KDM3) & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g17454 No alias histone demethylase *(KDM3) & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g11073 No alias histone demethylase *(KDM3) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g13468 No alias histone demethylase *(KDM3) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g20293 No alias histone demethylase *(KDM3) & original description: none 0.07 OrthoFinder output from all 47 species
Als_g54566 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g09074 No alias histone demethylase *(KDM3) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g04079 No alias histone demethylase *(KDM3) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.06G031200.1 Ceric.06G031200 histone demethylase *(KDM3) & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.11G069000.1 Ceric.11G069000 histone demethylase *(KDM3) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.21G018000.1 Ceric.21G018000 histone demethylase *(KDM3) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.21G078400.1 Ceric.21G078400 histone demethylase *(KDM3) & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g14457 No alias histone demethylase *(KDM3) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g11918 No alias histone demethylase *(KDM3) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g12281 No alias histone demethylase *(KDM3) & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g25444 No alias auxiliary component *(JMJ24) of COMPASS histone... 0.03 OrthoFinder output from all 47 species
Dcu_g41882 No alias histone demethylase *(KDM3) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g09266 No alias histone demethylase *(KDM3) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g27471 No alias histone demethylase *(KDM3) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01031114001 No alias RNA biosynthesis.transcriptional activation.JUMONJI... 0.02 OrthoFinder output from all 47 species
LOC_Os03g31594.1 LOC_Os03g31594 histone demethylase (KDM3). transcription factor (JUMONJI) 0.04 OrthoFinder output from all 47 species
Len_g12082 No alias histone demethylase *(KDM3) & original description: none 0.05 OrthoFinder output from all 47 species
Len_g18303 No alias histone demethylase *(KDM3) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g41796 No alias histone demethylase *(KDM3) & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g04275 No alias histone demethylase *(KDM3) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g40363 No alias histone demethylase *(KDM3) & original description: none 0.05 OrthoFinder output from all 47 species
MA_103030g0010 No alias histone demethylase (KDM3). transcription factor (JUMONJI) 0.02 OrthoFinder output from all 47 species
MA_126442g0010 No alias histone demethylase (KDM3). transcription factor (JUMONJI) 0.03 OrthoFinder output from all 47 species
MA_136209g0010 No alias histone demethylase (KDM3). transcription factor (JUMONJI) 0.02 OrthoFinder output from all 47 species
Msp_g20297 No alias histone demethylase *(KDM3) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g25890 No alias histone demethylase *(KDM3) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g05897 No alias histone demethylase *(KDM3) & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g09343 No alias histone demethylase *(KDM3) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g20918 No alias histone demethylase *(KDM3) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g25616 No alias histone demethylase *(KDM3) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g38696 No alias histone demethylase *(KDM3) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g45466 No alias histone demethylase *(KDM3) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g15776 No alias histone demethylase *(KDM3) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g11101 No alias histone demethylase *(KDM3) & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g31029 No alias histone demethylase *(KDM3) & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003123 No alias histone demethylase *(KDM3) & original description: CDS=1-2763 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0021.g008328 No alias histone demethylase *(KDM3) & original description: CDS=500-2434 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0110.g020614 No alias histone demethylase *(KDM3) & original description: CDS=1-3996 0.04 OrthoFinder output from all 47 species
Sam_g28431 No alias histone demethylase *(KDM3) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g078790.4.1 Solyc02g078790 histone demethylase (KDM3). transcription factor (JUMONJI) 0.02 OrthoFinder output from all 47 species
Spa_g21917 No alias histone demethylase *(KDM3) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g10184 No alias histone demethylase *(KDM3) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e010541_P001 Zm00001e010541 histone demethylase (KDM3) 0.03 OrthoFinder output from all 47 species
Zm00001e025393_P001 Zm00001e025393 histone demethylase (KDM3). transcription factor (JUMONJI) 0.04 OrthoFinder output from all 47 species
Zm00001e035224_P001 Zm00001e035224 histone demethylase (KDM3) 0.03 OrthoFinder output from all 47 species
Zm00001e038213_P003 Zm00001e038213 histone demethylase (KDM3). transcription factor (JUMONJI) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003968 RNA-dependent RNA polymerase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR003347 JmjC_dom 1652 1748
IPR014977 WRC_dom 7 41
No external refs found!