Lfl_g15634 (OPCL1)


Aliases : OPCL1

Description : not classified & original description: none


Gene families : OG0000359 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000359_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g15634

Target Alias Description ECC score Gene Family Method Actions
Adi_g020210 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g11897 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g17436 OPCL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g27234 OPCL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g30549 OPCL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene45695.t2 OPCL1, Aspi01Gene45695 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene63195.t1 OPCL1, Aspi01Gene63195 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g30890 OPCL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.11G077600.1 Ceric.11G077600 not classified & original description: pacid=50595629... 0.04 OrthoFinder output from all 47 species
Ceric.25G005800.1 OPCL1, Ceric.25G005800 not classified & original description: pacid=50594129... 0.03 OrthoFinder output from all 47 species
Dcu_g17079 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g17286 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01008694001 OPCL1 4-coumarate--CoA ligase-like 5 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01031500001 No alias 4-coumarate--CoA ligase-like 7 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_18693 OPCL1 OPC-8:CoA synthetase 0.02 OrthoFinder output from all 47 species
LOC_Os01g67540.1 LOC_Os01g67540 4-coumarate--CoA ligase-like 6 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
Len_g14710 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g09388 OPCL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g42148 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g12256 OPCL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g17189 OPCL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g17956 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo123905 No alias 4-coumarate--CoA ligase-like 7 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Smo181279 No alias 4-coumarate--CoA ligase-like 7 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc03g111170.3.1 Solyc03g111170 4-coumarate--CoA ligase-like 9 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Tin_g12748 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e000264_P001 OPCL1, Zm00001e000264 OPC-8:CoA synthetase 0.03 OrthoFinder output from all 47 species
Zm00001e004865_P001 Zm00001e004865 4-coumarate--CoA ligase-like 1 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009073 aromatic amino acid family biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR025110 AMP-bd_C 505 580
IPR000873 AMP-dep_Synth/Lig_com 52 496
No external refs found!