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  5. Aop_g60479

Aop_g60479 (SECA1, AtcpSecA, AGY1)


Aliases : SECA1, AtcpSecA, AGY1

Description : component *(SecA1) of thylakoid membrane Sec1 translocation system & original description: none


Gene families : OG0001541 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001541_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g60479
Cluster HCCA: Cluster_271

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00116920 SECA1, AtcpSecA,... Protein translocation.chloroplast.thylakoid membrane... 0.08 OrthoFinder output from all 47 species
AT4G01800 SECA1, AtcpSecA, AGY1 Albino or Glassy Yellow 1 0.03 OrthoFinder output from all 47 species
Adi_g007063 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.13 OrthoFinder output from all 47 species
Aev_g01548 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.06 OrthoFinder output from all 47 species
Ala_g03630 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.03 OrthoFinder output from all 47 species
Ala_g26842 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.03 OrthoFinder output from all 47 species
Aob_g02321 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.06 OrthoFinder output from all 47 species
Azfi_s0155.g053632 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.05 OrthoFinder output from all 47 species
Cba_g17139 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.03 OrthoFinder output from all 47 species
Ceric.02G067600.1 SECA1, AtcpSecA,... component *(SecA1) of thylakoid membrane Sec1... 0.11 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000219.51 SECA1, AtcpSecA, AGY1 Protein translocase subunit SecA, chloroplastic... 0.01 OrthoFinder output from all 47 species
Cre12.g517900 SECA1, AtcpSecA, AGY1 Protein translocation.chloroplast.thylakoid membrane... 0.03 OrthoFinder output from all 47 species
Dac_g06495 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.09 OrthoFinder output from all 47 species
Dac_g06496 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.09 OrthoFinder output from all 47 species
Dcu_g05773 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.04 OrthoFinder output from all 47 species
Dde_g09974 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.09 OrthoFinder output from all 47 species
Dde_g13633 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.04 OrthoFinder output from all 47 species
Ehy_g07099 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.03 OrthoFinder output from all 47 species
GSVIVT01028249001 SECA1, AtcpSecA, AGY1 Protein translocation.chloroplast.thylakoid membrane... 0.09 OrthoFinder output from all 47 species
Gb_00858 SECA1, AtcpSecA, AGY1 Protein translocase subunit SecA, chloroplastic... 0.03 OrthoFinder output from all 47 species
Gb_34931 SECA1, AtcpSecA, AGY1 component SecA1 of thylakoid membrane Sec1 translocation system 0.08 OrthoFinder output from all 47 species
LOC_Os01g21820.1 SECA1, AtcpSecA,... component SecA2 of inner envelope Sec2 post-import... 0.08 OrthoFinder output from all 47 species
Len_g36322 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.11 OrthoFinder output from all 47 species
MA_304459g0010 SECA1, AtcpSecA, AGY1 Protein translocase subunit SecA, chloroplastic... 0.06 OrthoFinder output from all 47 species
MA_8762g0010 SECA1, AtcpSecA, AGY1 Protein translocase subunit SECA1, chloroplastic... 0.02 OrthoFinder output from all 47 species
Mp5g09750.1 SECA1, AtcpSecA, AGY1 component SecA1 of thylakoid membrane Sec1 translocation system 0.06 OrthoFinder output from all 47 species
Msp_g23935 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.04 OrthoFinder output from all 47 species
Nbi_g15165 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.05 OrthoFinder output from all 47 species
Nbi_g30518 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.08 OrthoFinder output from all 47 species
Ore_g18515 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.03 OrthoFinder output from all 47 species
Pir_g06026 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.03 OrthoFinder output from all 47 species
Ppi_g14444 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.03 OrthoFinder output from all 47 species
Sam_g15982 No alias component *(SecA1) of thylakoid membrane Sec1... 0.02 OrthoFinder output from all 47 species
Sam_g28166 No alias component *(SecA1) of thylakoid membrane Sec1... 0.02 OrthoFinder output from all 47 species
Smo156007 SECA1, AtcpSecA, AGY1 Protein translocation.chloroplast.thylakoid membrane... 0.02 OrthoFinder output from all 47 species
Solyc01g080840.3.1 SECA1, AtcpSecA,... component SecA1 of thylakoid membrane Sec1 translocation system 0.06 OrthoFinder output from all 47 species
Spa_g10168 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.12 OrthoFinder output from all 47 species
Spa_g17299 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.07 OrthoFinder output from all 47 species
Tin_g12949 SECA1, AtcpSecA, AGY1 component *(SecA1) of thylakoid membrane Sec1... 0.03 OrthoFinder output from all 47 species
Zm00001e017535_P001 SECA1, AtcpSecA,... component SecA1 of thylakoid membrane Sec1 translocation system 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0017038 protein import IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
CC GO:0005778 peroxisomal membrane IEP HCCA
BP GO:0006536 glutamate metabolic process IEP HCCA
BP GO:0006537 glutamate biosynthetic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
MF GO:0015930 glutamate synthase activity IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
BP GO:0016559 peroxisome fission IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031903 microbody membrane IEP HCCA
MF GO:0032977 membrane insertase activity IEP HCCA
CC GO:0042579 microbody IEP HCCA
BP GO:0043648 dicarboxylic acid metabolic process IEP HCCA
BP GO:0043650 dicarboxylic acid biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0048285 organelle fission IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140597 protein carrier chaperone IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR011130 SecA_preprotein_X-link_dom 319 425
IPR011115 SecA_DEAD 101 469
IPR011116 SecA_Wing/Scaffold 777 991
No external refs found!