Aop_g58555 (LOP1, TRN1)


Aliases : LOP1, TRN1

Description : not classified & original description: none


Gene families : OG0000350 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000350_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g58555

Target Alias Description ECC score Gene Family Method Actions
Aev_g39266 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g19733 LOP1, TRN1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene45653.t1 LOP1, TRN1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.18G016000.1 Ceric.18G016000 not classified & original description: pacid=50622446... 0.05 OrthoFinder output from all 47 species
Ceric.18G016100.1 LOP1, TRN1,... not classified & original description: pacid=50621243... 0.04 OrthoFinder output from all 47 species
Dac_g05356 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g17426 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g18756 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g22269 LOP1, TRN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g36702 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g38470 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g44747 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g28705 LOP1, TRN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g39240 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g14064 LOP1, TRN1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g14563 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g23036 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g38222 LOP1, TRN1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g41660 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g12913 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g42467 LOP1, TRN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29933 LOP1, TRN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g42088 LOP1, TRN1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g14611 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g29059 LOP1, TRN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g45781 LOP1, TRN1 not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR032171 COR 624 755
No external refs found!