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  5. Aop_g58398

Aop_g58398 (emb2458)


Aliases : emb2458

Description : component *(FtsHi) of protein translocation ATPase motor complex & original description: none


Gene families : OG0007060 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007060_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g58398
Cluster HCCA: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
AT3G04340 emb2458 FtsH extracellular protease family 0.05 OrthoFinder output from all 47 species
Adi_g013441 emb2458 component *(FtsHi) of protein translocation ATPase motor... 0.03 OrthoFinder output from all 47 species
Als_g09187 emb2458 component *(FtsHi) of protein translocation ATPase motor... 0.04 OrthoFinder output from all 47 species
Cba_g13698 emb2458 component *(FtsHi) of protein translocation ATPase motor... 0.04 OrthoFinder output from all 47 species
Ceric.26G060900.1 emb2458, Ceric.26G060900 component *(FtsHi) of protein translocation ATPase motor... 0.04 OrthoFinder output from all 47 species
Dde_g02993 emb2458 component *(FtsHi) of protein translocation ATPase motor... 0.06 OrthoFinder output from all 47 species
GSVIVT01021791001 emb2458 Probable inactive ATP-dependent zinc metalloprotease... 0.03 OrthoFinder output from all 47 species
Gb_28496 emb2458 Probable inactive ATP-dependent zinc metalloprotease... 0.03 OrthoFinder output from all 47 species
Len_g01924 emb2458 component *(FtsHi) of protein translocation ATPase motor... 0.04 OrthoFinder output from all 47 species
Ore_g16438 emb2458 component *(FtsHi) of protein translocation ATPase motor... 0.04 OrthoFinder output from all 47 species
Sam_g14588 No alias component *(FtsHi) of protein translocation ATPase motor... 0.03 OrthoFinder output from all 47 species
Solyc02g032960.2.1 emb2458, Solyc02g032960 Probable inactive ATP-dependent zinc metalloprotease... 0.03 OrthoFinder output from all 47 species
Solyc02g032970.4.1 emb2458, Solyc02g032970 Probable inactive ATP-dependent zinc metalloprotease... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATP hydrolysis activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
BP GO:0046903 secretion IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
BP GO:0140352 export from cell IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:1901981 phosphatidylinositol phosphate binding IEP HCCA
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR000642 Peptidase_M41 1238 1369
IPR003959 ATPase_AAA_core 914 1047
No external refs found!