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  5. Aop_g56919

Aop_g56919


Description : not classified & original description: none


Gene families : OG0000284 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000284_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g56919
Cluster HCCA: Cluster_275

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00146p00085750 evm_27.TU.AmTr_v1... Protein ALP1-like OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
AT4G29780 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.12 OrthoFinder output from all 47 species
AT5G12010 No alias unknown protein; INVOLVED IN: response to salt stress;... 0.04 OrthoFinder output from all 47 species
Ala_g04527 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ala_g08311 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g11900 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g21380 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g14039 No alias not classified & original description: none 0.14 OrthoFinder output from all 47 species
Als_g21780 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g30059 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene08000.t1 Aspi01Gene08000 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene47954.t1 Aspi01Gene47954 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Cba_g10827 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dac_g28438 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dde_g20948 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g12572 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01035416001 No alias Protein ALP1-like OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
LOC_Os01g40070.1 LOC_Os01g40070 Protein ANTAGONIST OF LIKE HETEROCHROMATIN PROTEIN 1... 0.08 OrthoFinder output from all 47 species
LOC_Os05g51520.1 LOC_Os05g51520 Protein ALP1-like OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Len_g11152 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
Len_g48929 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Lfl_g25028 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_1840174g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g11559 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Nbi_g16873 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g03122 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g09548 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Ppi_g13031 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Sacu_v1.1_s0085.g018320 No alias not classified & original description: CDS=1-1524 0.04 OrthoFinder output from all 47 species
Solyc07g040960.1.1 Solyc07g040960 Protein ALP1-like OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
Solyc08g062680.1.1 Solyc08g062680 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Solyc12g009000.1.1 Solyc12g009000 Protein ALP1-like OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
Spa_g04326 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g04327 No alias not classified & original description: none 0.13 OrthoFinder output from all 47 species
Spa_g07912 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g07473 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0015035 protein-disulfide reductase activity IEP HCCA
MF GO:0015036 disulfide oxidoreductase activity IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor IEP HCCA
MF GO:0016972 thiol oxidase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0034975 protein folding in endoplasmic reticulum IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR027806 HARBI1_dom 2 128
No external refs found!