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  5. Lfl_g14233

Lfl_g14233 (PPC2, ATPPC2)


Aliases : PPC2, ATPPC2

Description : EC_4.1 carbon-carbon lyase & original description: none


Gene families : OG0000643 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000643_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g14233

Target Alias Description ECC score Gene Family Method Actions
AT1G53310 PEPC1, ATPEPC1,... phosphoenolpyruvate carboxylase 1 0.03 OrthoFinder output from all 47 species
AT1G68750 ATPPC4, PPC4 phosphoenolpyruvate carboxylase 4 0.02 OrthoFinder output from all 47 species
Azfi_s0006.g010453 PEPC1, ATPEPC1,... EC_4.1 carbon-carbon lyase & original description: CDS=306-3104 0.07 OrthoFinder output from all 47 species
Cba_g14717 PEPC1, ATPEPC1,... EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021319.59 ATPPC4, PPC4 Phosphoenolpyruvate carboxylase 3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Dac_g02366 ATPPC3, PPC3 EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g23356 PPC2, ATPPC2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08955 ATPPC3, PPC3 EC_4.1 carbon-carbon lyase & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os01g11054.1 ATPPC3, PPC3,... PEP carboxylase 0.04 OrthoFinder output from all 47 species
LOC_Os02g14770.1 PPC2, ATPPC2,... PEP carboxylase 0.02 OrthoFinder output from all 47 species
LOC_Os08g27840.1 PEPC1, ATPEPC1,... PEP carboxylase 0.04 OrthoFinder output from all 47 species
Len_g30934 PPC2, ATPPC2 EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002475 ATPPC3, PPC3 EC_4.1 carbon-carbon lyase & original description: CDS=296-3220 0.05 OrthoFinder output from all 47 species
Smo447920 PPC2, ATPPC2 Photosynthesis.CAM/C4 photosynthesis.phosphoenolpyruvate... 0.02 OrthoFinder output from all 47 species
Solyc07g062530.3.1 ATPPC3, PPC3,... PEP carboxylase 0.02 OrthoFinder output from all 47 species
Tin_g04167 ATPPC3, PPC3 EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e033797_P001 PEPC1, ATPEPC1,... PEP carboxylase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006099 tricarboxylic acid cycle IEA Interproscan
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEA Interproscan
BP GO:0015977 carbon fixation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEP HCCA
InterPro domains Description Start Stop
IPR021135 PEP_COase 46 972
No external refs found!