MA_10433955g0020


Description : 19.12 tetrapyrrole synthesis.magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase Encodes a putative ZIP protein with varying mRNA accumulation in leaves, stems and roots. Has a consensus carboxylate-bridged di-iron binding site. COPPER RESPONSE DEFECT 1 (CRD1)


Gene families : OG_01_0003733 (Gene family) Phylogenetic Tree(s): OG0003733_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): MA_10433955g0020
Cluster HCCA cluster: Cluster_478

Target Alias Description ECC score Gene Family Method Actions
AT3G56940 ACSF, CHL27, CRD1 dicarboxylate diiron protein, putative (Crd1) 0.08 Gene family
Cpa|evm.model.tig00000093.153 No alias 19.12 tetrapyrrole synthesis.magnesium-protoporphyrin IX... 0.01 Gene family
Cre12.g510050 No alias 19.12 tetrapyrrole synthesis.magnesium-protoporphyrin IX... 0.08 Gene family
GSVIVT01025841001 No alias 19.12 tetrapyrrole synthesis.magnesium-protoporphyrin IX... 0.05 Gene family
LOC_Os01g17170 Os01g0279100 19.12 tetrapyrrole synthesis.magnesium-protoporphyrin IX... 0.08 Gene family
Smo267431 PACid_15411272 19.12 tetrapyrrole synthesis.magnesium-protoporphyrin IX... 0.05 Gene family
Smo89989 PACid_15413340 19.12 tetrapyrrole synthesis.magnesium-protoporphyrin IX... 0.04 Gene family
Solyc10g077040.2.1 Solyc10g077040.2 19.12 tetrapyrrole synthesis.magnesium-protoporphyrin IX... 0.09 Gene family
Zm00001d008230 GRMZM2G081462 19.12 tetrapyrrole synthesis.magnesium-protoporphyrin IX... 0.09 Gene family
Zm00001d040463 GRMZM2G043109 19.12 tetrapyrrole synthesis.magnesium-protoporphyrin IX... 0.05 Gene family

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA InterProScan
MF GO:0046872 metal ion binding IEA InterProScan
BP GO:0055114 oxidation-reduction process IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003251 Rubrerythrin 1 109
No external refs found!