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Description : component *(eS8) of small ribosomal-subunit (SSU) proteome & original description: none
Gene families : OG0000906 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000906_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Aop_g50196 | |
| Cluster | HCCA: Cluster_198 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT5G20290 | No alias | Ribosomal protein S8e family protein | 0.06 | OrthoFinder output from all 47 species | |
| Ala_g38098 | No alias | component *(eS8) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g11567 | No alias | component *(eS8) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.01G124400.1 | Ceric.01G124400 | component *(eS8) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00020610.79 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.05 | OrthoFinder output from all 47 species | |
| Cre06.g272800 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g03069 | No alias | component *(eS8) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01037763001 | No alias | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_28325 | No alias | component RPS8 of SSU proteome | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os02g28810.1 | LOC_Os02g28810 | 40S ribosomal protein S8 OS=Oryza sativa subsp. japonica... | 0.04 | OrthoFinder output from all 47 species | |
| MA_14571g0010 | No alias | component RPS8 of SSU proteome | 0.02 | OrthoFinder output from all 47 species | |
| Mp2g16300.1 | No alias | component RPS8 of SSU proteome | 0.02 | OrthoFinder output from all 47 species | |
| Pp3c12_18260V3.1 | Pp3c12_18260 | Ribosomal protein S8e family protein | 0.01 | OrthoFinder output from all 47 species | |
| Pp3c13_20020V3.1 | Pp3c13_20020 | Ribosomal protein S8e family protein | 0.02 | OrthoFinder output from all 47 species | |
| Pp3c19_6490V3.1 | Pp3c19_6490 | Ribosomal protein S8e family protein | 0.01 | OrthoFinder output from all 47 species | |
| Pp3c4_11370V3.1 | Pp3c4_11370 | Ribosomal protein S8e family protein | 0.01 | OrthoFinder output from all 47 species | |
| Sam_g15855 | No alias | component *(eS8) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g27314 | No alias | component *(eS8) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g44958 | No alias | component *(eS8) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc06g007570.3.1 | Solyc06g007570 | component RPS8 of SSU proteome | 0.05 | OrthoFinder output from all 47 species | |
| Solyc06g083180.4.1 | Solyc06g083180 | component RPS8 of SSU proteome | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g53727 | No alias | component *(eS8) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g37888 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e024995_P001 | Zm00001e024995 | component RPS8 of SSU proteome | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e024996_P001 | Zm00001e024996 | component RPS8 of SSU proteome | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
| MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
| MF | GO:0005198 | structural molecule activity | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005840 | ribosome | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0006412 | translation | IEP | HCCA |
| BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043603 | amide metabolic process | IEP | HCCA |
| BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR022309 | Ribosomal_S8e/biogenesis_NSA2 | 3 | 173 |
| No external refs found! |