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  5. Aop_g48888

Aop_g48888 (ABR1)


Aliases : ABR1

Description : subgroup ERF-X transcription factor & original description: none


Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g48888
Cluster HCCA: Cluster_168

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00266920 RAP2.11,... External stimuli response.biotic... 0.03 OrthoFinder output from all 47 species
AMTR_s00009p00147970 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
AT1G04370 ERF14, ATERF14 Ethylene-responsive element binding factor 14 0.03 OrthoFinder output from all 47 species
AT2G31230 ATERF15, ERF15 ethylene-responsive element binding factor 15 0.03 OrthoFinder output from all 47 species
AT3G16770 ERF72, EBP, ATEBP, RAP2.3 ethylene-responsive element binding protein 0.03 OrthoFinder output from all 47 species
AT5G47230 ERF5, ATERF-5, ATERF5 ethylene responsive element binding factor 5 0.04 OrthoFinder output from all 47 species
AT5G61600 ERF104 ethylene response factor 104 0.04 OrthoFinder output from all 47 species
Ala_g04104 TINY2 subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene21110.t1 DEAR2, Aspi01Gene21110 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.25G020600.1 ATERF12, ERF12,... subgroup ERF-VIII transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ehy_g08445 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g11898 No alias subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01017572001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.05 OrthoFinder output from all 47 species
Gb_00125 TINY2 transcription factor (DREB) 0.05 OrthoFinder output from all 47 species
Gb_08382 RAP2.9, DEAR5 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_19320 RAP2.12 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Gb_41444 No alias transcription factor (DREB) 0.05 OrthoFinder output from all 47 species
LOC_Os03g09170.1 RAP2.4, LOC_Os03g09170 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
LOC_Os04g34970.1 ERF110, LOC_Os04g34970 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os08g35240.1 LOC_Os08g35240 Ethylene-responsive transcription factor ERF017... 0.02 OrthoFinder output from all 47 species
LOC_Os12g40960.1 LOC_Os12g40960 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os12g41060.1 LOC_Os12g41060 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Lfl_g30898 RAP2.12 transcription factor component *(HRE/RAP2.12) of... 0.06 OrthoFinder output from all 47 species
MA_10427743g0020 TMO3, CRF2 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_10432141g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_121581g0010 No alias Ethylene-responsive transcription factor RAP2-13... 0.03 OrthoFinder output from all 47 species
MA_19420g0010 No alias transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
MA_83118g0010 No alias transcription factor (DREB) 0.05 OrthoFinder output from all 47 species
MA_9321671g0010 tny transcription factor (DREB) 0.06 OrthoFinder output from all 47 species
Nbi_g11442 No alias subgroup ERF-V transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g37577 HRE2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g091760.3.1 RAP2.11, Solyc01g091760 transcription factor (ERF). transcription factor (ERN1) 0.04 OrthoFinder output from all 47 species
Solyc02g067020.1.1 RAP2.11, Solyc02g067020 transcription factor (ERF). transcription factor (ERN1) 0.05 OrthoFinder output from all 47 species
Solyc04g014530.1.1 ERF1, ATERF1,... transcription factor (ERF) 0.05 OrthoFinder output from all 47 species
Solyc05g013540.1.1 DRN-LIKE, ESR2,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Zm00001e023224_P001 Zm00001e023224 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEP HCCA
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 132 181
No external refs found!