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  5. Lfl_g13197

Lfl_g13197 (PHR2)


Aliases : PHR2

Description : not classified & original description: none


Gene families : OG0002446 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002446_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g13197

Target Alias Description ECC score Gene Family Method Actions
AT2G47590 PHR2 photolyase/blue-light receptor 2 0.06 OrthoFinder output from all 47 species
Adi_g079479 PHR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g06176 PHR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g13086 PHR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene52251.t1 PHR2, Aspi01Gene52251 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0008.g011414 PHR2 not classified & original description: CDS=126-1718 0.03 OrthoFinder output from all 47 species
Ceric.17G008500.1 PHR2, Ceric.17G008500 not classified & original description: pacid=50618046... 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020965.69 PHR2 Cryptochrome DASH, chloroplastic/mitochondrial... 0.03 OrthoFinder output from all 47 species
Dac_g07106 PHR2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g14608 PHR2 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ehy_g12595 PHR2 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Len_g22295 PHR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp1g05530.1 PHR2 Blue-light photoreceptor PHR2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Nbi_g11246 PHR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g10865 PHR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c1_18130V3.1 PHR2, Pp3c1_18130 photolyase/blue-light receptor 2 0.01 OrthoFinder output from all 47 species
Ppi_g16597 PHR2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g28591 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0002097 tRNA wobble base modification IEP HCCA
BP GO:0002100 tRNA wobble adenosine to inosine editing IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0004000 adenosine deaminase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006382 adenosine to inosine editing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008251 tRNA-specific adenosine deaminase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016553 base conversion or substitution editing IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP HCCA
MF GO:0019239 deaminase activity IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006050 DNA_photolyase_N 174 332
No external refs found!