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  5. Lfl_g13190

Lfl_g13190


Description : component *(NOT10) of mRNA deadenylation CCR4-NOT complex & original description: none


Gene families : OG0004355 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004355_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g13190

Target Alias Description ECC score Gene Family Method Actions
Aop_g08264 No alias component *(NOT10) of mRNA deadenylation CCR4-NOT... 0.02 OrthoFinder output from all 47 species
Aspi01Gene00529.t1 Aspi01Gene00529 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.23G060100.1 Ceric.23G060100 component *(NOT10) of mRNA deadenylation CCR4-NOT... 0.03 OrthoFinder output from all 47 species
MA_160950g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc07g007890.3.1 Solyc07g007890 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Tin_g22557 No alias component *(NOT10) of mRNA deadenylation CCR4-NOT... 0.04 OrthoFinder output from all 47 species
Zm00001e009419_P004 Zm00001e009419 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR019734 TPR_repeat 858 891
No external refs found!