1. Home
  2. Species
  3. Lygodium flexuosum
  4. Sequence
  5. Lfl_g13127

Lfl_g13127


Description : not classified & original description: none


Gene families : OG0004023 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004023_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g13127

Target Alias Description ECC score Gene Family Method Actions
Adi_g114117 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g12875 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g10416 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.12G037000.1 Ceric.12G037000 not classified & original description: pacid=50600637... 0.04 OrthoFinder output from all 47 species
Ceric.1Z219100.1 Ceric.1Z219100 not classified & original description: pacid=50617071... 0.05 OrthoFinder output from all 47 species
Dcu_g23419 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g09268 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g14876 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g16749 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006174 No alias not classified & original description: CDS=16-1263 0.02 OrthoFinder output from all 47 species
Sam_g15789 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g40231 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP HCCA
MF GO:0030151 molybdenum ion binding IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 311 358
IPR002885 Pentatricopeptide_repeat 248 274
IPR002885 Pentatricopeptide_repeat 140 165
IPR002885 Pentatricopeptide_repeat 176 203
IPR002885 Pentatricopeptide_repeat 382 430
No external refs found!