Lfl_g13122 (ATHB5, ATHB-5, HB5)

Aliases : ATHB5, ATHB-5, HB5

Description : HD-ZIP I/II-type transcription factor & original description: none

Gene families : OG0000129 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000129_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Lfl_g13122
Cluster	HCCA: Cluster_20

Target	Alias	Description	ECC score	Gene Family Method
AT2G22430	HB6, ATHB6	homeobox protein 6	0.02	OrthoFinder output from all 47 species
AT2G46680	HB-7, ATHB-7, ATHB7	homeobox 7	0.02	OrthoFinder output from all 47 species
AT3G61890	HB-12, ATHB-12, ATHB12	homeobox 12	0.03	OrthoFinder output from all 47 species
Adi_g116605	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Als_g03703	ATHB16, HB16, ATHB-16	regulatory protein *(LMI1) of floral meristem identity...	0.04	OrthoFinder output from all 47 species
Als_g10561	ATHB13	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Als_g57801	ATHB1, ATHB-1,...	HD-ZIP I/II-type transcription factor & original...	0.04	OrthoFinder output from all 47 species
Aob_g06571	ATHB1, ATHB-1,...	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Aop_g09203	ATHB1, ATHB-1,...	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Aspi01Gene20017.t1	ATHB3, HB-3,...	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Aspi01Gene48842.t1	ATHB13, Aspi01Gene48842	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Aspi01Gene63495.t1	ATHB13, Aspi01Gene63495	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Cba_g27646	ATHB3, HB-3, ATHB-3, HAT7	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g39032	ATHB13	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Dcu_g15833	ATHB16, HB16, ATHB-16	regulatory protein *(LMI1) of floral meristem identity...	0.03	OrthoFinder output from all 47 species
Dde_g17794	ATHB5, ATHB-5, HB5	HD-ZIP I/II-type transcription factor & original...	0.04	OrthoFinder output from all 47 species
GSVIVT01027407001	HB-7, ATHB-7, ATHB7	RNA biosynthesis.transcriptional activation.HB...	0.03	OrthoFinder output from all 47 species
LOC_Os09g21180.1	ATHB1, ATHB-1,...	transcription factor (HD-ZIP I/II)	0.02	OrthoFinder output from all 47 species
Lfl_g22332	ATHB1, ATHB-1,...	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Ore_g16236	ATHB1, ATHB-1,...	regulatory protein *(LMI1) of floral meristem identity...	0.02	OrthoFinder output from all 47 species
Ore_g32849	ATHB3, HB-3, ATHB-3, HAT7	regulatory protein *(LMI1) of floral meristem identity...	0.02	OrthoFinder output from all 47 species
Pir_g24965	HB6, ATHB6	HD-ZIP I/II-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0047.g013473	ATHB1, ATHB-1,...	HD-ZIP I/II-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Solyc11g010270.2.1	ATHB5, ATHB-5,...	transcription factor (HD-ZIP I/II)	0.02	OrthoFinder output from all 47 species
Zm00001e007381_P001	HB-7, ATHB-7,...	transcription factor (HD-ZIP I/II)	0.03	OrthoFinder output from all 47 species
Zm00001e015274_P001	ATHB5, ATHB-5,...	transcription factor (HD-ZIP I/II)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000145	exocyst	IEP	HCCA
MF	GO:0004089	carbonate dehydratase activity	IEP	HCCA
MF	GO:0005543	phospholipid binding	IEP	HCCA
MF	GO:0005546	phosphatidylinositol-4,5-bisphosphate binding	IEP	HCCA
BP	GO:0006887	exocytosis	IEP	HCCA
MF	GO:0008107	galactoside 2-alpha-L-fucosyltransferase activity	IEP	HCCA
MF	GO:0008270	zinc ion binding	IEP	HCCA
MF	GO:0008289	lipid binding	IEP	HCCA
MF	GO:0008417	fucosyltransferase activity	IEP	HCCA
BP	GO:0016192	vesicle-mediated transport	IEP	HCCA
MF	GO:0016624	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor	IEP	HCCA
MF	GO:0016758	hexosyltransferase activity	IEP	HCCA
MF	GO:0016835	carbon-oxygen lyase activity	IEP	HCCA
MF	GO:0016836	hydro-lyase activity	IEP	HCCA
MF	GO:0016903	oxidoreductase activity, acting on the aldehyde or oxo group of donors	IEP	HCCA
MF	GO:0031127	alpha-(1,2)-fucosyltransferase activity	IEP	HCCA
BP	GO:0032940	secretion by cell	IEP	HCCA
MF	GO:0035091	phosphatidylinositol binding	IEP	HCCA
BP	GO:0042546	cell wall biogenesis	IEP	HCCA
MF	GO:0043167	ion binding	IEP	HCCA
MF	GO:0043169	cation binding	IEP	HCCA
BP	GO:0044085	cellular component biogenesis	IEP	HCCA
MF	GO:0046872	metal ion binding	IEP	HCCA
BP	GO:0046903	secretion	IEP	HCCA
MF	GO:0046914	transition metal ion binding	IEP	HCCA
BP	GO:0071554	cell wall organization or biogenesis	IEP	HCCA
CC	GO:0099023	vesicle tethering complex	IEP	HCCA
BP	GO:0140352	export from cell	IEP	HCCA
MF	GO:1901981	phosphatidylinositol phosphate binding	IEP	HCCA
MF	GO:1902936	phosphatidylinositol bisphosphate binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001356	Homeobox_dom	196	243
IPR003106	Leu_zip_homeo	245	284

External Links

No external refs found!

Lfl_g13122 (ATHB5, ATHB-5, HB5)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation