Lfl_g13104

Description : regulatory GTPase (NUG2) of LSU processome & original description: none

Gene families : OG0005924 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005924_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Lfl_g13104

Target	Alias	Description	ECC score	Gene Family Method
Als_g08227	No alias	regulatory GTPase (NUG2) of LSU processome & original...	0.03	OrthoFinder output from all 47 species
Aop_g12078	No alias	regulatory GTPase (NUG2) of LSU processome & original...	0.07	OrthoFinder output from all 47 species
Ceric.29G055900.1	Ceric.29G055900	regulatory GTPase (NUG2) of LSU processome & original...	0.03	OrthoFinder output from all 47 species
Cre07.g340050	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.02	OrthoFinder output from all 47 species
Dac_g17916	No alias	regulatory GTPase (NUG2) of LSU processome & original...	0.04	OrthoFinder output from all 47 species
LOC_Os03g22890.2	LOC_Os03g22890	NUG2 LSU processome regulatory GTPase	0.02	OrthoFinder output from all 47 species
Len_g20768	No alias	regulatory GTPase (NUG2) of LSU processome & original...	0.05	OrthoFinder output from all 47 species
Pp3c1_3230V3.1	Pp3c1_3230	GTP-binding family protein	0.01	OrthoFinder output from all 47 species
Tin_g01985	No alias	regulatory GTPase (NUG2) of LSU processome & original...	0.03	OrthoFinder output from all 47 species
Zm00001e001677_P001	Zm00001e001677	NUG2 LSU processome regulatory GTPase	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0003743	translation initiation factor activity	IEP	HCCA
MF	GO:0004175	endopeptidase activity	IEP	HCCA
MF	GO:0004176	ATP-dependent peptidase activity	IEP	HCCA
MF	GO:0004222	metalloendopeptidase activity	IEP	HCCA
MF	GO:0005524	ATP binding	IEP	HCCA
BP	GO:0006479	protein methylation	IEP	HCCA
BP	GO:0006480	N-terminal protein amino acid methylation	IEP	HCCA
MF	GO:0008135	translation factor activity, RNA binding	IEP	HCCA
BP	GO:0008213	protein alkylation	IEP	HCCA
MF	GO:0008237	metallopeptidase activity	IEP	HCCA
MF	GO:0030554	adenyl nucleotide binding	IEP	HCCA
MF	GO:0031072	heat shock protein binding	IEP	HCCA
BP	GO:0031365	N-terminal protein amino acid modification	IEP	HCCA
BP	GO:0032259	methylation	IEP	HCCA
MF	GO:0032559	adenyl ribonucleotide binding	IEP	HCCA
BP	GO:0043414	macromolecule methylation	IEP	HCCA
MF	GO:0045182	translation regulator activity	IEP	HCCA
MF	GO:0051082	unfolded protein binding	IEP	HCCA
MF	GO:0090079	translation regulator activity, nucleic acid binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR006073	GTP-bd	311	376
IPR012971	NOG2_N_dom	44	170

External Links

No external refs found!