Lfl_g13029 (AGL21)

Aliases : AGL21

Description : MADS/AGL-type transcription factor & original description: none

Gene families : OG0000022 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Lfl_g13029
Cluster	HCCA: Cluster_116

Target	Alias	Description	ECC score	Gene Family Method
AT5G60910	AGL8, FUL	AGAMOUS-like 8	0.04	OrthoFinder output from all 47 species
Aev_g09257	SHP2, AGL5	MADS/AGL-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g38807	AGL91	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g02975	SHP2, AGL5	MADS/AGL-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Aop_g32548	SHP2, AGL5	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g32969	SOC1, AGL20, ATSOC1	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene06309.t1	Aspi01Gene06309	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene17774.t1	SHP2, AGL5,...	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene17818.t1	SHP2, AGL5,...	MADS/AGL-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene19457.t1	AGL16, Aspi01Gene19457	MADS/AGL-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene63673.t1	STK, AGL11,...	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0009.g011722	No alias	MADS/AGL-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Azfi_s0684.g082058	AGL21	MADS/AGL-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Ceric.05G029400.1	AGL16, Ceric.05G029400	MADS/AGL-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Ceric.08G048300.1	AGL42, Ceric.08G048300	MADS/AGL-type transcription factor & original...	0.05	OrthoFinder output from all 47 species
Ceric.08G048600.1	AGL10, CAL1,...	not classified & original description: pacid=50638045...	0.05	OrthoFinder output from all 47 species
Dac_g04574	AGL16	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g13201	AGL16	MADS/AGL-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Dcu_g19342	AGL8, FUL	MADS/AGL-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Dde_g09338	AGL14	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g24818	SOC1, AGL20, ATSOC1	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01014093001	No alias	RNA biosynthesis.transcriptional activation.MADS box...	0.03	OrthoFinder output from all 47 species
GSVIVT01015649001	No alias	No description available	0.04	OrthoFinder output from all 47 species
GSVIVT01022182001	AGL104	RNA biosynthesis.transcriptional activation.MADS box...	0.03	OrthoFinder output from all 47 species
GSVIVT01035477001	AGL30	RNA biosynthesis.transcriptional activation.MADS box...	0.03	OrthoFinder output from all 47 species
Gb_03068	AGL16	transcription factor (MADS/AGL)	0.04	OrthoFinder output from all 47 species
LOC_Os06g11970.1	AGL66, LOC_Os06g11970	transcription factor (MADS/AGL)	0.02	OrthoFinder output from all 47 species
LOC_Os06g22760.1	AGL61, DIA,...	transcription factor (MADS/AGL)	0.02	OrthoFinder output from all 47 species
LOC_Os08g38590.1	AGL104, LOC_Os08g38590	transcription factor (MADS/AGL)	0.02	OrthoFinder output from all 47 species
LOC_Os12g21850.1	AGL61, DIA,...	transcription factor (MADS/AGL)	0.02	OrthoFinder output from all 47 species
Len_g22235	SOC1, AGL20, ATSOC1	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Len_g49478	GL19, AGL19	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g14500	AGL2, SEP1	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Lfl_g36730	AGL6	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Lfl_g37453	AGL6	not classified & original description: none	0.07	OrthoFinder output from all 47 species
Lfl_g40743	SHP2, AGL5	MADS/AGL-type transcription factor & original description: none	0.06	OrthoFinder output from all 47 species
MA_19387g0010	AGL9, SEP3	transcription factor (MADS/AGL)	0.03	OrthoFinder output from all 47 species
MA_2986g0010	No alias	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
MA_3200737g0010	AGL24	transcription factor (MADS/AGL)	0.03	OrthoFinder output from all 47 species
MA_899014g0010	SVP, AGL22	transcription factor (MADS/AGL)	0.03	OrthoFinder output from all 47 species
Pir_g10184	AGL16	MADS/AGL-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g46921	SOC1, AGL20, ATSOC1	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g48804	AGL8, FUL	regulatory protein *(AP1/CAL/FUL) of floral meristem...	0.04	OrthoFinder output from all 47 species
Pir_g54533	MAF2, AGL31	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003070	AGL14	MADS/AGL-type transcription factor & original...	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0115.g020974	GL19, AGL19	MADS/AGL-type transcription factor & original...	0.03	OrthoFinder output from all 47 species
Sam_g30262	No alias	MADS/AGL-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Solyc02g091550.2.1	AGL21, Solyc02g091550	transcription factor (MADS/AGL)	0.02	OrthoFinder output from all 47 species
Solyc10g017640.1.1	GL19, AGL19,...	transcription factor (MADS/AGL)	0.02	OrthoFinder output from all 47 species
Spa_g47543	AGL16	MADS/AGL-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Spa_g47544	AGL16	MADS/AGL-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e015447_P001	AGL6, Zm00001e015447	transcription factor (MADS/AGL)	0.04	OrthoFinder output from all 47 species
Zm00001e027034_P001	PI, Zm00001e027034	transcription factor (MADS/AGL)	0.03	OrthoFinder output from all 47 species
Zm00001e030373_P001	AGL10, CAL1,...	transcription factor (MADS/AGL)	0.02	OrthoFinder output from all 47 species
Zm00001e034629_P001	AGL9, SEP3,...	transcription factor (MADS/AGL)	0.03	OrthoFinder output from all 47 species
Zm00001e039774_P001	SHP2, AGL5,...	transcription factor (MADS/AGL)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0009055	electron transfer activity	IEP	HCCA
MF	GO:0035673	oligopeptide transmembrane transporter activity	IEP	HCCA
MF	GO:0042887	amide transmembrane transporter activity	IEP	HCCA
MF	GO:1904680	peptide transmembrane transporter activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002100	TF_MADSbox	132	179
IPR002487	TF_Kbox	207	292

External Links

No external refs found!

Lfl_g13029 (AGL21)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation