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Aliases : EMB2016
Description : regulatory component *(VIR) of adenosine N6-methyltransferase complex & original description: none
Gene families : OG0007626 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007626_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00002p00079350 | EMB2016,... | RNA processing.RNA modification.mRNA... | 0.06 | OrthoFinder output from all 47 species | |
| AT3G05680 | EMB2016 | embryo defective 2016 | 0.09 | OrthoFinder output from all 47 species | |
| Adi_g117188 | EMB2016 | regulatory component *(VIR) of adenosine... | 0.09 | OrthoFinder output from all 47 species | |
| Aev_g20810 | EMB2016 | regulatory component *(VIR) of adenosine... | 0.05 | OrthoFinder output from all 47 species | |
| Ala_g07640 | EMB2016 | regulatory component *(VIR) of adenosine... | 0.08 | OrthoFinder output from all 47 species | |
| Als_g16425 | EMB2016 | regulatory component *(VIR) of adenosine... | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g21900 | EMB2016 | regulatory component *(VIR) of adenosine... | 0.06 | OrthoFinder output from all 47 species | |
| Aop_g09034 | EMB2016 | regulatory component *(VIR) of adenosine... | 0.05 | OrthoFinder output from all 47 species | |
| Aspi01Gene70940.t1 | EMB2016, Aspi01Gene70940 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene70941.t1 | EMB2016, Aspi01Gene70941 | regulatory component *(VIR) of adenosine... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene70942.t1 | EMB2016, Aspi01Gene70942 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0028.g023923 | EMB2016 | not classified & original description: CDS=163-1173 | 0.05 | OrthoFinder output from all 47 species | |
| Cba_g12918 | EMB2016 | regulatory component *(VIR) of adenosine... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.09G038400.1 | EMB2016, Ceric.09G038400 | regulatory component *(VIR) of adenosine... | 0.15 | OrthoFinder output from all 47 species | |
| Dcu_g34300 | EMB2016 | regulatory component *(VIR) of adenosine... | 0.09 | OrthoFinder output from all 47 species | |
| GSVIVT01020162001 | EMB2016 | RNA processing.RNA modification.mRNA... | 0.08 | OrthoFinder output from all 47 species | |
| LOC_Os03g35340.1 | EMB2016, LOC_Os03g35340 | regulatory component VIR of adenosine... | 0.05 | OrthoFinder output from all 47 species | |
| Len_g19134 | EMB2016 | regulatory component *(VIR) of adenosine... | 0.05 | OrthoFinder output from all 47 species | |
| MA_10427076g0010 | EMB2016 | no description available(sp|f4j8g7|vir_arath : 177.0) | 0.03 | OrthoFinder output from all 47 species | |
| Mp1g10290.1 | EMB2016 | regulatory component VIR of adenosine... | 0.06 | OrthoFinder output from all 47 species | |
| Msp_g13667 | EMB2016 | regulatory component *(VIR) of adenosine... | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g41774 | EMB2016 | regulatory component *(VIR) of adenosine... | 0.07 | OrthoFinder output from all 47 species | |
| Ore_g19695 | EMB2016 | regulatory component *(VIR) of adenosine... | 0.05 | OrthoFinder output from all 47 species | |
| Pnu_g13801 | EMB2016 | regulatory component *(VIR) of adenosine... | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g08793 | EMB2016 | regulatory component *(VIR) of adenosine... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0032.g010851 | EMB2016 | regulatory component *(VIR) of adenosine... | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g18026 | No alias | regulatory component *(VIR) of adenosine... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc03g020020.3.1 | EMB2016, Solyc03g020020 | regulatory component VIR of adenosine... | 0.11 | OrthoFinder output from all 47 species | |
| Spa_g21962 | EMB2016 | regulatory component *(VIR) of adenosine... | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e012524_P001 | EMB2016, Zm00001e012524 | regulatory component VIR of adenosine... | 0.07 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | HCCA |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | HCCA |
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| BP | GO:0006397 | mRNA processing | IEP | HCCA |
| BP | GO:0008380 | RNA splicing | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |