Lfl_g12936


Description : histone methyltransferase *(ATXR1) & original description: none


Gene families : OG0000533 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000533_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g12936

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00266780 ATXR1, SDG35,... Chromatin organisation.histone modifications.histone... 0.03 OrthoFinder output from all 47 species
Adi_g022893 ATXR1, SDG35 histone methyltransferase *(ATXR1) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g07228 ATXR1, SDG35 histone methyltransferase *(ATXR1) & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g32810 ATXR1, SDG35 histone methyltransferase *(ATXR1) & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g27658 ATXR1, SDG35 histone methyltransferase *(ATXR1) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g02027 ATXR1, SDG35 histone methyltransferase *(ATXR1) & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.36G050700.1 ATXR1, SDG35,... histone methyltransferase *(ATXR1) & original... 0.04 OrthoFinder output from all 47 species
Ceric.36G054000.1 ATXR1, SDG35,... histone methyltransferase *(ATXR1) & original... 0.03 OrthoFinder output from all 47 species
Cre12.g510550 No alias No description available 0.01 OrthoFinder output from all 47 species
Dde_g18985 No alias histone methyltransferase *(ATXR1) & original description: none 0.03 OrthoFinder output from all 47 species
MA_22501g0020 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Ppi_g17104 No alias histone methyltransferase *(ATXR1) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0135.g022359 No alias histone methyltransferase *(ATXR1) & original... 0.03 OrthoFinder output from all 47 species
Tin_g31778 ATXR1, SDG35 histone methyltransferase *(ATXR1) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
CC GO:0005681 spliceosomal complex IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR001214 SET_dom 124 280
No external refs found!