Aop_g38906 (BBM)

Aliases : BBM

Description : AP2-type transcription factor *(WRI/AIL) & original description: none

Gene families : OG0000110 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000110_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Aop_g38906

Target	Alias	Description	ECC score	Gene Family Method
AT1G16060	ADAP	ARIA-interacting double AP2 domain protein	0.03	OrthoFinder output from all 47 species
Adi_g030001	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Adi_g056777	WRI1, ATWRI1, ASML1, WRI	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Adi_g074051	ADAP	AP2-type transcription factor *(WRI/AIL) & original...	0.04	OrthoFinder output from all 47 species
Adi_g088509	WRI1, ATWRI1, ASML1, WRI	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Adi_g088510	WRI1, ATWRI1, ASML1, WRI	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ala_g25494	BBM	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Aob_g21188	WRI1, ATWRI1, ASML1, WRI	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Aob_g21389	BBM	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Aob_g22039	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.04	OrthoFinder output from all 47 species
Aob_g28184	WRI1, ATWRI1, ASML1, WRI	RAM1-dependent transcription factor *(WRI5) & original...	0.02	OrthoFinder output from all 47 species
Ceric.14G068200.1	AP2, FLO2, FL1,...	AP2-type transcription factor *(WRI/AIL) & original...	0.04	OrthoFinder output from all 47 species
Ceric.1Z150100.1	AP2, FLO2, FL1,...	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Dcu_g26568	WRI1, ATWRI1, ASML1, WRI	AP2-type transcription factor *(WRI/AIL) & original...	0.04	OrthoFinder output from all 47 species
Ehy_g17996	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
GSVIVT01016352001	RAP2.7, TOE1	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	OrthoFinder output from all 47 species
LOC_Os03g19900.1	AIL7, LOC_Os03g19900	transcription factor (AP2)	0.02	OrthoFinder output from all 47 species
LOC_Os06g05340.1	LOC_Os06g05340	transcription factor (AP2). RAM1-dependent transcription...	0.03	OrthoFinder output from all 47 species
LOC_Os06g43220.1	AP2, FLO2, FL1,...	transcription factor (AP2)	0.03	OrthoFinder output from all 47 species
LOC_Os07g03250.1	DRG, CKC, CKC1,...	transcription factor (AP2)	0.02	OrthoFinder output from all 47 species
LOC_Os08g34360.1	LOC_Os08g34360	transcription factor (AP2)	0.02	OrthoFinder output from all 47 species
LOC_Os11g03540.1	WRI1, ATWRI1,...	transcription factor (AP2)	0.03	OrthoFinder output from all 47 species
Len_g18966	AP2, FLO2, FL1	AP2-type transcription factor *(WRI/AIL) & original...	0.04	OrthoFinder output from all 47 species
Len_g44143	No alias	RAM1-dependent transcription factor *(WRI5) & original...	0.05	OrthoFinder output from all 47 species
Len_g46832	ADAP	AP2-type transcription factor *(WRI/AIL) & original...	0.05	OrthoFinder output from all 47 species
Len_g46833	ADAP	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Lfl_g15299	AP2, FLO2, FL1	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
MA_113625g0010	No alias	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
MA_86195g0010	PLT2	transcription factor (AP2)	0.02	OrthoFinder output from all 47 species
Mp7g13270.1	ADAP	transcription factor (AP2)	0.03	OrthoFinder output from all 47 species
Ore_g27093	WRI1, ATWRI1, ASML1, WRI	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Pir_g44006	RAP2.7, TOE1	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Ppi_g40008	BBM	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Ppi_g59880	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000274	AP2, FLO2, FL1	not classified & original description: CDS=216-980	0.03	OrthoFinder output from all 47 species
Solyc03g044300.3.1	AP2, FLO2, FL1,...	transcription factor (AP2)	0.02	OrthoFinder output from all 47 species
Solyc03g117720.3.1	ADAP, Solyc03g117720	transcription factor (AP2)	0.03	OrthoFinder output from all 47 species
Spa_g13908	No alias	RAM1-dependent transcription factor *(WRI5) & original...	0.06	OrthoFinder output from all 47 species
Tin_g34262	ADAP	RAM1-dependent transcription factor *(WRI5) & original...	0.03	OrthoFinder output from all 47 species
Zm00001e006752_P001	AP2, FLO2, FL1,...	transcription factor (AP2)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0005576	extracellular region	IEP	HCCA
CC	GO:0005618	cell wall	IEP	HCCA
BP	GO:0005975	carbohydrate metabolic process	IEP	HCCA
BP	GO:0005976	polysaccharide metabolic process	IEP	HCCA
BP	GO:0006073	cellular glucan metabolic process	IEP	HCCA
MF	GO:0016758	hexosyltransferase activity	IEP	HCCA
MF	GO:0016762	xyloglucan:xyloglucosyl transferase activity	IEP	HCCA
CC	GO:0030312	external encapsulating structure	IEP	HCCA
BP	GO:0044042	glucan metabolic process	IEP	HCCA
BP	GO:0044262	cellular carbohydrate metabolic process	IEP	HCCA
BP	GO:0044264	cellular polysaccharide metabolic process	IEP	HCCA
MF	GO:0046527	glucosyltransferase activity	IEP	HCCA
CC	GO:0048046	apoplast	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	436	486
IPR001471	AP2/ERF_dom	334	392

External Links

No external refs found!

Aop_g38906 (BBM)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation