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  5. Aop_g38766

Aop_g38766 (RPL18)


Aliases : RPL18

Description : component *(eL18) of large ribosomal-subunit (LSU) proteome & original description: none


Gene families : OG0001263 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001263_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g38766
Cluster HCCA: Cluster_116

Target Alias Description ECC score Gene Family Method Actions
Adi_g013370 RPL18 component *(eL18) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000142.18 RPL18 60S ribosomal protein L18 (Fragment) OS=Cicer arietinum 0.03 OrthoFinder output from all 47 species
Cre12.g512600 RPL18 Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
Pp3c2_32510V3.1 RPL18, Pp3c2_32510 ribosomal protein L18 0.01 OrthoFinder output from all 47 species
Pp3c2_34080V3.1 RPL18, Pp3c2_34080 ribosomal protein L18 0.01 OrthoFinder output from all 47 species
Pp3c7_22030V3.1 RPL18, Pp3c7_22030 ribosomal protein L18 0.01 OrthoFinder output from all 47 species
Ppi_g35462 RPL18 component *(eL18) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Sam_g06146 No alias component *(eL18) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Sam_g35041 No alias component *(eL18) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Smo267976 RPL18 Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
Solyc01g099900.4.1 RPL18, Solyc01g099900 component RPL18 of LSU proteome component 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004478 methionine adenosyltransferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0046500 S-adenosylmethionine metabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR021131 Ribosomal_L18e/L15P 2 188
No external refs found!