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  5. Aop_g37687

Aop_g37687 (ATXYL1, XYL1, TRG1)


Aliases : ATXYL1, XYL1, TRG1

Description : EC_3.2 glycosylase & original description: none


Gene families : OG0001972 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001972_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g37687
Cluster HCCA: Cluster_90

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00079p00038550 ATXYL1, XYL1,... Cell wall.hemicellulose.xyloglucan.modification and... 0.03 OrthoFinder output from all 47 species
Aspi01Gene49732.t1 ATXYL1, XYL1,... EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g17772 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01011904001 ATXYL1, XYL1, TRG1 Cell wall.hemicellulose.xyloglucan.modification and... 0.02 OrthoFinder output from all 47 species
GSVIVT01037959001 No alias Enzyme classification.EC_3 hydrolases.EC_3.2... 0.03 OrthoFinder output from all 47 species
Gb_06380 ATXYL1, XYL1, TRG1 1,6-alpha-xylosidase 0.03 OrthoFinder output from all 47 species
LOC_Os01g03950.1 ATXYL1, XYL1,... 1,6-alpha-xylosidase 0.04 OrthoFinder output from all 47 species
Solyc05g009470.4.1 ATXYL1, XYL1,... 1,6-alpha-xylosidase 0.02 OrthoFinder output from all 47 species
Spa_g18091 ATXYL1, XYL1, TRG1 EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e017022_P001 ATXYL1, XYL1,... 1,6-alpha-xylosidase 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0005199 structural constituent of cell wall IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0009664 plant-type cell wall organization IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071669 plant-type cell wall organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR031727 Gal_mutarotase_N 58 178
IPR000322 Glyco_hydro_31 267 760
IPR025887 Glyco_hydro_31_N_dom 182 246
No external refs found!