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  5. Lfl_g12296

Lfl_g12296


Description : not classified & original description: none


Gene families : OG0002660 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0002660_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g12296

Target Alias Description ECC score Gene Family Method Actions
Ala_g14895 No alias not classified & original description: none 0.01 OrthoFinder output from all 39 species
Als_g23395 No alias not classified & original description: none 0.02 OrthoFinder output from all 39 species
Aop_g68576 No alias not classified & original description: none 0.01 OrthoFinder output from all 39 species
Cba_g13364 No alias not classified & original description: none 0.01 OrthoFinder output from all 39 species
Dcu_g10166 No alias not classified & original description: none 0.01 OrthoFinder output from all 39 species
Spa_g07984 No alias not classified & original description: none 0.02 OrthoFinder output from all 39 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 525 589
IPR000504 RRM_dom 428 491
IPR000504 RRM_dom 348 417
No external refs found!