Aliases : HCF173
Description : protein involved in PS-II assembly *(HCF173) & original description: none
Gene families : OG0006399 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006399_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Lfl_g12273 | |
Cluster | HCCA: Cluster_126 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT1G16720 | HCF173 | high chlorophyll fluorescence phenotype 173 | 0.03 | OrthoFinder output from all 47 species | |
Adi_g026392 | HCF173 | protein involved in PS-II assembly *(HCF173) & original... | 0.05 | OrthoFinder output from all 47 species | |
Aev_g02401 | HCF173 | protein involved in PS-II assembly *(HCF173) & original... | 0.04 | OrthoFinder output from all 47 species | |
Ala_g08503 | HCF173 | protein involved in PS-II assembly *(HCF173) & original... | 0.04 | OrthoFinder output from all 47 species | |
Als_g18490 | HCF173 | protein involved in PS-II assembly *(HCF173) & original... | 0.04 | OrthoFinder output from all 47 species | |
Aop_g05654 | HCF173 | protein involved in PS-II assembly *(HCF173) & original... | 0.05 | OrthoFinder output from all 47 species | |
Aspi01Gene21050.t1 | HCF173, Aspi01Gene21050 | protein involved in PS-II assembly *(HCF173) & original... | 0.03 | OrthoFinder output from all 47 species | |
Cba_g03951 | HCF173 | protein involved in PS-II assembly *(HCF173) & original... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.24G028300.1 | HCF173, Ceric.24G028300 | protein involved in PS-II assembly *(HCF173) & original... | 0.07 | OrthoFinder output from all 47 species | |
Cre13.g578650 | HCF173 | Photosynthesis.photophosphorylation.photosystem... | 0.04 | OrthoFinder output from all 47 species | |
Dac_g00930 | HCF173 | protein involved in PS-II assembly *(HCF173) & original... | 0.03 | OrthoFinder output from all 47 species | |
Dde_g21297 | HCF173 | protein involved in PS-II assembly *(HCF173) & original... | 0.05 | OrthoFinder output from all 47 species | |
GSVIVT01029443001 | HCF173 | Photosynthesis.photophosphorylation.photosystem... | 0.08 | OrthoFinder output from all 47 species | |
LOC_Os02g04510.1 | HCF173, LOC_Os02g04510 | HCF173 protein involved in PS-II assembly | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os06g49120.1 | HCF173, LOC_Os06g49120 | HCF173 protein involved in PS-II assembly | 0.06 | OrthoFinder output from all 47 species | |
Len_g03320 | HCF173 | protein involved in PS-II assembly *(HCF173) & original... | 0.04 | OrthoFinder output from all 47 species | |
MA_21385g0010 | HCF173 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
Mp3g04800.1 | HCF173 | HCF173 protein involved in PS-II assembly | 0.02 | OrthoFinder output from all 47 species | |
Msp_g10500 | HCF173 | protein involved in PS-II assembly *(HCF173) & original... | 0.05 | OrthoFinder output from all 47 species | |
Nbi_g01268 | HCF173 | protein involved in PS-II assembly *(HCF173) & original... | 0.08 | OrthoFinder output from all 47 species | |
Ore_g17922 | HCF173 | protein involved in PS-II assembly *(HCF173) & original... | 0.06 | OrthoFinder output from all 47 species | |
Ppi_g16606 | HCF173 | protein involved in PS-II assembly *(HCF173) & original... | 0.03 | OrthoFinder output from all 47 species | |
Smo183274 | HCF173 | Photosynthesis.photophosphorylation.photosystem... | 0.05 | OrthoFinder output from all 47 species | |
Solyc08g016080.3.1 | HCF173, Solyc08g016080 | HCF173 protein involved in PS-II assembly | 0.03 | OrthoFinder output from all 47 species | |
Spa_g26192 | HCF173 | protein involved in PS-II assembly *(HCF173) & original... | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e013206_P002 | HCF173, Zm00001e013206 | HCF173 protein involved in PS-II assembly | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003674 | molecular_function | IEP | HCCA |
BP | GO:0006605 | protein targeting | IEP | HCCA |
BP | GO:0006612 | protein targeting to membrane | IEP | HCCA |
BP | GO:0006613 | cotranslational protein targeting to membrane | IEP | HCCA |
BP | GO:0006614 | SRP-dependent cotranslational protein targeting to membrane | IEP | HCCA |
BP | GO:0006720 | isoprenoid metabolic process | IEP | HCCA |
BP | GO:0006721 | terpenoid metabolic process | IEP | HCCA |
BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
MF | GO:0008270 | zinc ion binding | IEP | HCCA |
BP | GO:0008299 | isoprenoid biosynthetic process | IEP | HCCA |
BP | GO:0008610 | lipid biosynthetic process | IEP | HCCA |
BP | GO:0009058 | biosynthetic process | IEP | HCCA |
BP | GO:0015031 | protein transport | IEP | HCCA |
BP | GO:0016114 | terpenoid biosynthetic process | IEP | HCCA |
MF | GO:0016725 | oxidoreductase activity, acting on CH or CH2 groups | IEP | HCCA |
MF | GO:0016746 | acyltransferase activity | IEP | HCCA |
MF | GO:0016747 | acyltransferase activity, transferring groups other than amino-acyl groups | IEP | HCCA |
MF | GO:0016854 | racemase and epimerase activity | IEP | HCCA |
MF | GO:0016857 | racemase and epimerase activity, acting on carbohydrates and derivatives | IEP | HCCA |
BP | GO:0033365 | protein localization to organelle | IEP | HCCA |
BP | GO:0044255 | cellular lipid metabolic process | IEP | HCCA |
BP | GO:0045047 | protein targeting to ER | IEP | HCCA |
MF | GO:0046429 | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity | IEP | HCCA |
MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
MF | GO:0050661 | NADP binding | IEP | HCCA |
BP | GO:0051668 | localization within membrane | IEP | HCCA |
MF | GO:0052592 | oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor | IEP | HCCA |
BP | GO:0070972 | protein localization to endoplasmic reticulum | IEP | HCCA |
BP | GO:0072594 | establishment of protein localization to organelle | IEP | HCCA |
BP | GO:0072599 | establishment of protein localization to endoplasmic reticulum | IEP | HCCA |
BP | GO:0072657 | protein localization to membrane | IEP | HCCA |
BP | GO:0090150 | establishment of protein localization to membrane | IEP | HCCA |
No external refs found! |