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  5. Aop_g36059

Aop_g36059 (ATREV3, REV3)


Aliases : ATREV3, REV3

Description : catalytic component *(REV3) of DNA polymerase zeta complex & original description: none


Gene families : OG0004845 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004845_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g36059
Cluster HCCA: Cluster_301

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene43612.t2 ATREV3, REV3,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.06G067000.1 ATREV3, REV3,... catalytic component *(REV3) of DNA polymerase zeta... 0.02 OrthoFinder output from all 47 species
Dac_g43515 ATREV3, REV3 catalytic component *(REV3) of DNA polymerase zeta... 0.03 OrthoFinder output from all 47 species
LOC_Os07g47284.1 ATREV3, REV3,... DNA polymerase zeta catalytic subunit OS=Arabidopsis... 0.01 OrthoFinder output from all 47 species
Lfl_g11330 ATREV3, REV3 catalytic component *(REV3) of DNA polymerase zeta... 0.05 OrthoFinder output from all 47 species
Spa_g09116 ATREV3, REV3 catalytic component *(REV3) of DNA polymerase zeta... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0005092 GDP-dissociation inhibitor activity IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006914 autophagy IEP HCCA
BP GO:0007264 small GTPase mediated signal transduction IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0042393 histone binding IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
BP GO:0061919 process utilizing autophagic mechanism IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
CC GO:1902554 serine/threonine protein kinase complex IEP HCCA
CC GO:1902911 protein kinase complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
CC GO:1990316 Atg1/ULK1 kinase complex IEP HCCA
InterPro domains Description Start Stop
IPR006133 DNA-dir_DNA_pol_B_exonuc 58 227
IPR006133 DNA-dir_DNA_pol_B_exonuc 1142 1326
IPR025687 Znf-C4pol 1905 1979
IPR006134 DNA-dir_DNA_pol_B_multi_dom 1393 1841
No external refs found!