1. Home
  2. Species
  3. Amblovenatum opulentum
  4. Sequence
  5. Aop_g31879

Aop_g31879 (TOZ)


Aliases : TOZ

Description : SSU processome assembly factor *(TOZ) & original description: none


Gene families : OG0004926 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004926_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g31879

Target Alias Description ECC score Gene Family Method Actions
Als_g14040 TOZ SSU processome assembly factor *(TOZ) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0068.g036365 TOZ SSU processome assembly factor *(TOZ) & original... 0.04 OrthoFinder output from all 47 species
Cre07.g344050 TOZ Protein biosynthesis.cytosolic ribosome.small subunit... 0.01 OrthoFinder output from all 47 species
MA_10601g0010 TOZ no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp8g08070.1 TOZ SSU processome assembly factor (TOZ) 0.02 OrthoFinder output from all 47 species
Spa_g12532 TOZ SSU processome assembly factor *(TOZ) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e041546_P002 TOZ, Zm00001e041546 SSU processome assembly factor (TOZ) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0017056 structural constituent of nuclear pore IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR013934 Utp13_C 672 806
IPR001680 WD40_repeat 137 175
IPR001680 WD40_repeat 534 566
IPR001680 WD40_repeat 614 650
IPR001680 WD40_repeat 571 608
IPR001680 WD40_repeat 53 88
IPR001680 WD40_repeat 491 525
IPR001680 WD40_repeat 432 471
IPR001680 WD40_repeat 388 428
IPR001680 WD40_repeat 94 131
IPR001680 WD40_repeat 180 217
No external refs found!