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  5. Aop_g30274

Aop_g30274


Description : mannan synthesis accessory protein *(MSR) & original description: none


Gene families : OG0003025 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003025_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g30274 profile, including all conditions, is shown. Additional statClade
Cluster HCCA: Cluster_18

Target Alias Description ECC score Gene Family Method Actions
AT3G21190 No alias O-fucosyltransferase family protein 0.04 OrthoFinder output from all 47 species
Adi_g056291 No alias mannan synthesis accessory protein *(MSR) & original... 0.02 OrthoFinder output from all 47 species
Ala_g01824 No alias mannan synthesis accessory protein *(MSR) & original... 0.04 OrthoFinder output from all 47 species
Ala_g36936 No alias mannan synthesis accessory protein *(MSR) & original... 0.06 OrthoFinder output from all 47 species
Aob_g03269 No alias mannan synthesis accessory protein *(MSR) & original... 0.02 OrthoFinder output from all 47 species
Ceric.06G058400.1 Ceric.06G058400 mannan synthesis accessory protein *(MSR) & original... 0.04 OrthoFinder output from all 47 species
Dac_g12170 No alias mannan synthesis accessory protein *(MSR) & original... 0.06 OrthoFinder output from all 47 species
Dac_g15452 No alias mannan synthesis accessory protein *(MSR) & original... 0.07 OrthoFinder output from all 47 species
GSVIVT01016156001 No alias Cell wall.hemicellulose.heteromannan.synthesis.mannan... 0.03 OrthoFinder output from all 47 species
Lfl_g02782 No alias mannan synthesis accessory protein *(MSR) & original... 0.05 OrthoFinder output from all 47 species
Ppi_g01040 No alias mannan synthesis accessory protein *(MSR) & original... 0.08 OrthoFinder output from all 47 species
Sam_g39163 No alias mannan synthesis accessory protein *(MSR) & original... 0.03 OrthoFinder output from all 47 species
Solyc06g063240.3.1 Solyc06g063240 mannan synthesis accessory protein 0.02 OrthoFinder output from all 47 species
Spa_g18257 No alias mannan synthesis accessory protein *(MSR) & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000808 origin recognition complex IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005664 nuclear origin of replication recognition complex IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0007155 cell adhesion IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
InterPro domains Description Start Stop
IPR019378 GDP-Fuc_O-FucTrfase 23 254
No external refs found!