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  5. Aop_g29630

Aop_g29630 (PSBR)


Aliases : PSBR

Description : component *(PsbR) of PS-II complex & original description: none


Gene families : OG0002211 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002211_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g29630
Cluster HCCA: Cluster_271

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00092p00162140 PSBR,... Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.07 OrthoFinder output from all 47 species
AT1G79040 PSBR photosystem II subunit R 0.03 OrthoFinder output from all 47 species
Adi_g011483 PSBR component *(PsbR) of PS-II complex & original description: none 0.1 OrthoFinder output from all 47 species
Aev_g13057 PSBR component *(PsbR) of PS-II complex & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g04077 PSBR component *(PsbR) of PS-II complex & original description: none 0.06 OrthoFinder output from all 47 species
Als_g05205 PSBR component *(PsbR) of PS-II complex & original description: none 0.1 OrthoFinder output from all 47 species
Aob_g09168 PSBR component *(PsbR) of PS-II complex & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g27127 PSBR component *(PsbR) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene37382.t1 PSBR, Aspi01Gene37382 component *(PsbR) of PS-II complex & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g02302 PSBR component *(PsbR) of PS-II complex & original description: none 0.13 OrthoFinder output from all 47 species
Ceric.16G056100.1 PSBR, Ceric.16G056100 component *(PsbR) of PS-II complex & original... 0.01 OrthoFinder output from all 47 species
Ceric.20G086200.1 PSBR, Ceric.20G086200 component *(PsbR) of PS-II complex & original... 0.14 OrthoFinder output from all 47 species
Cre06.g261000 PSBR Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.06 OrthoFinder output from all 47 species
Dac_g12213 PSBR component *(PsbR) of PS-II complex & original description: none 0.09 OrthoFinder output from all 47 species
Dac_g32722 PSBR component *(PsbR) of PS-II complex & original description: none 0.1 OrthoFinder output from all 47 species
Dcu_g25420 PSBR component *(PsbR) of PS-II complex & original description: none 0.09 OrthoFinder output from all 47 species
Dcu_g28297 PSBR component *(PsbR) of PS-II complex & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g00341 PSBR component *(PsbR) of PS-II complex & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g22404 PSBR component *(PsbR) of PS-II complex & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01020484001 PSBR Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.06 OrthoFinder output from all 47 species
Gb_04149 PSBR component PsbR of PS-II complex 0.14 OrthoFinder output from all 47 species
LOC_Os08g10020.1 PSBR, LOC_Os08g10020 component PsbR of PS-II complex 0.14 OrthoFinder output from all 47 species
Len_g00088 PSBR component *(PsbR) of PS-II complex & original description: none 0.17 OrthoFinder output from all 47 species
Lfl_g18574 PSBR component *(PsbR) of PS-II complex & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g19724 PSBR component *(PsbR) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g38512 PSBR component *(PsbR) of PS-II complex & original description: none 0.06 OrthoFinder output from all 47 species
MA_282g0010 PSBR component PsbR of PS-II complex 0.09 OrthoFinder output from all 47 species
Mp3g05840.1 PSBR component PsbR of PS-II complex 0.12 OrthoFinder output from all 47 species
Msp_g02196 PSBR component *(PsbR) of PS-II complex & original description: none 0.19 OrthoFinder output from all 47 species
Nbi_g40620 PSBR component *(PsbR) of PS-II complex & original description: none 0.09 OrthoFinder output from all 47 species
Ore_g06143 PSBR component *(PsbR) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g06144 PSBR component *(PsbR) of PS-II complex & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g25679 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g09918 PSBR component *(PsbR) of PS-II complex & original description: none 0.09 OrthoFinder output from all 47 species
Pp3c16_5650V3.1 PSBR, Pp3c16_5650 photosystem II subunit R 0.02 OrthoFinder output from all 47 species
Ppi_g01588 PSBR component *(PsbR) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g27322 PSBR component *(PsbR) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0170.g024344 PSBR component *(PsbR) of PS-II complex & original... 0.07 OrthoFinder output from all 47 species
Sam_g12723 No alias component *(PsbR) of PS-II complex & original description: none 0.06 OrthoFinder output from all 47 species
Solyc07g066310.3.1 PSBR, Solyc07g066310 component PsbR of PS-II complex 0.09 OrthoFinder output from all 47 species
Spa_g03368 PSBR component *(PsbR) of PS-II complex & original description: none 0.2 OrthoFinder output from all 47 species
Tin_g07988 PSBR component *(PsbR) of PS-II complex & original description: none 0.11 OrthoFinder output from all 47 species
Zm00001e021601_P001 PSBR, Zm00001e021601 component PsbR of PS-II complex 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0009523 photosystem II IEA Interproscan
CC GO:0009654 photosystem II oxygen evolving complex IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
CC GO:0042651 thylakoid membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005261 monoatomic cation channel activity IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
MF GO:0015252 proton channel activity IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP HCCA
CC GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP HCCA
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
MF GO:0098809 nitrite reductase activity IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006814 PSII_PsbR 51 140
No external refs found!