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  5. Aop_g29624

Aop_g29624 (SMU2)


Aliases : SMU2

Description : component *(SMU2) of SMU splicing factor complex & original description: none


Gene families : OG0004764 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004764_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g29624
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
Ceric.15G055900.1 SMU2, Ceric.15G055900 component *(SMU2) of SMU splicing factor complex &... 0.03 OrthoFinder output from all 47 species
Cre16.g688750 SMU2 Suppressor of mec-8 and unc-52 protein homolog 2... 0.03 OrthoFinder output from all 47 species
LOC_Os11g04950.1 SMU2, LOC_Os11g04950 Suppressor of mec-8 and unc-52 protein homolog 2... 0.02 OrthoFinder output from all 47 species
Mp5g17010.1 SMU2 Suppressor of mec-8 and unc-52 protein homolog 2... 0.02 OrthoFinder output from all 47 species
Spa_g08279 SMU2 component *(SMU2) of SMU splicing factor complex &... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005381 iron ion transmembrane transporter activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006826 iron ion transport IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0034755 iron ion transmembrane transport IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0046915 transition metal ion transmembrane transporter activity IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR012492 RED_C 523 629
IPR012916 RED_N 84 299
No external refs found!