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  5. Aop_g26718

Aop_g26718


Description : not classified & original description: none


Gene families : OG0013711 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0013711_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aop_g26718
Cluster HCCA: Cluster_327

Target Alias Description ECC score Gene Family Method Actions
Ceric.23G026300.1 Ceric.23G026300 not classified & original description: pacid=50609819... 0.05 OrthoFinder output from all 47 species
Nbi_g11496 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0016.g006786 No alias not classified & original description: CDS=436-3204 0.04 OrthoFinder output from all 47 species
Tin_g27175 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0043565 sequence-specific DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 163 210
IPR002885 Pentatricopeptide_repeat 265 311
IPR002885 Pentatricopeptide_repeat 62 109
IPR002885 Pentatricopeptide_repeat 470 499
IPR002885 Pentatricopeptide_repeat 572 596
IPR002885 Pentatricopeptide_repeat 340 363
IPR002885 Pentatricopeptide_repeat 806 833
IPR002885 Pentatricopeptide_repeat 671 701
IPR002885 Pentatricopeptide_repeat 368 398
IPR002885 Pentatricopeptide_repeat 644 668
IPR002885 Pentatricopeptide_repeat 239 263
No external refs found!