Aliases : IDD2, AtIDD2
Description : C2H2 subclass IDD transcription factor & original description: none
Gene families : OG0000265 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000265_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Adi_g057486 | MGP | C2H2 subclass IDD transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
Aob_g17401 | MGP | C2H2 subclass IDD transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
Cba_g17110 | No alias | C2H2 subclass IDD transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
Ehy_g17431 | IDD14, AtIDD14 | C2H2 subclass IDD transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
MA_26324g0010 | MGP | C2H2 zinc finger transcription factor | 0.03 | OrthoFinder output from all 47 species | |
Ore_g06563 | MGP | C2H2 subclass IDD transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
Pir_g20390 | IDD2, AtIDD2 | C2H2 subclass IDD transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
Pir_g50860 | IDD4, AtIDD4 | C2H2 subclass IDD transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
Pir_g61845 | MGP | C2H2 subclass IDD transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g07601 | MGP | C2H2 subclass IDD transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
Solyc02g062940.3.1 | Solyc02g062940 | C2H2 zinc finger transcription factor | 0.02 | OrthoFinder output from all 47 species | |
Solyc09g007550.3.1 | JKD, Solyc09g007550 | C2H2 zinc finger transcription factor | 0.03 | OrthoFinder output from all 47 species | |
Solyc09g065670.3.1 | MGP, Solyc09g065670 | C2H2 zinc finger transcription factor | 0.03 | OrthoFinder output from all 47 species | |
Spa_g08000 | MGP | C2H2 subclass IDD transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e003968_P002 | IDD4, AtIDD4,... | C2H2 zinc finger transcription factor | 0.02 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003723 | RNA binding | IEP | HCCA |
CC | GO:0005634 | nucleus | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006396 | RNA processing | IEP | HCCA |
BP | GO:0006397 | mRNA processing | IEP | HCCA |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
MF | GO:0008168 | methyltransferase activity | IEP | HCCA |
MF | GO:0008170 | N-methyltransferase activity | IEP | HCCA |
MF | GO:0008276 | protein methyltransferase activity | IEP | HCCA |
MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | HCCA |
BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
MF | GO:0016278 | lysine N-methyltransferase activity | IEP | HCCA |
MF | GO:0016279 | protein-lysine N-methyltransferase activity | IEP | HCCA |
MF | GO:0018024 | histone lysine N-methyltransferase activity | IEP | HCCA |
BP | GO:0031123 | RNA 3'-end processing | IEP | HCCA |
BP | GO:0031124 | mRNA 3'-end processing | IEP | HCCA |
MF | GO:0042054 | histone methyltransferase activity | IEP | HCCA |
CC | GO:0043226 | organelle | IEP | HCCA |
CC | GO:0043227 | membrane-bounded organelle | IEP | HCCA |
CC | GO:0043229 | intracellular organelle | IEP | HCCA |
CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR013087 | Znf_C2H2_type | 55 | 77 |
No external refs found! |