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  5. Aop_g25385

Aop_g25385 (At-RSZ22a, RSZ22a)


Aliases : At-RSZ22a, RSZ22a

Description : RNA splicing factor *(RSZ21/22) & original description: none


Gene families : OG0001173 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001173_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Aop_g25385

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00154210 At-RSZ22a,... RNA processing.RNA splicing.spliceosome-associated... 0.02 OrthoFinder output from all 47 species
Als_g04168 At-RSZ22a, RSZ22a RNA splicing factor *(RSZ21/22) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g62369 At-RSZ22a, RSZ22a RNA splicing factor *(RSZ21/22) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g06419 RSZ21, At-RSZ21,... RNA splicing factor *(RSZ21/22) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07876 At-RSZ22a, RSZ22a RNA splicing factor *(RSZ21/22) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g19642 RSZ21, At-RSZ21,... RNA splicing factor *(RSZ21/22) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g06025 At-RSZ22a, RSZ22a RNA splicing factor *(RSZ21/22) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g51941 At-RSZ22a, RSZ22a not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e016090_P001 At-RSZ22a,... RSZ21/22 RNA splicing factor 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006694 steroid biosynthetic process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
BP GO:0008202 steroid metabolic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
BP GO:0031047 RNA-mediated gene silencing IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
InterPro domains Description Start Stop
IPR001878 Znf_CCHC 98 113
IPR000504 RRM_dom 4 61
No external refs found!