Lfl_g11025 (THIC, PY)

Aliases : THIC, PY

Description : hydroxymethylpyrimidine phosphate synthase *(ThiC) & original description: none

Gene families : OG0002896 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002896_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Lfl_g11025
Cluster	HCCA: Cluster_126

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00010p00259490	THIC, PY,...	Coenzyme metabolism.thiamine pyrophosphate...	0.08	OrthoFinder output from all 47 species
Adi_g114023	THIC, PY	hydroxymethylpyrimidine phosphate synthase *(ThiC) &...	0.02	OrthoFinder output from all 47 species
Aev_g21302	THIC, PY	hydroxymethylpyrimidine phosphate synthase *(ThiC) &...	0.02	OrthoFinder output from all 47 species
Ala_g12895	THIC, PY	hydroxymethylpyrimidine phosphate synthase *(ThiC) &...	0.02	OrthoFinder output from all 47 species
Aob_g17338	THIC, PY	hydroxymethylpyrimidine phosphate synthase *(ThiC) &...	0.03	OrthoFinder output from all 47 species
Aop_g21432	THIC, PY	hydroxymethylpyrimidine phosphate synthase *(ThiC) &...	0.04	OrthoFinder output from all 47 species
Dcu_g42362	THIC, PY	hydroxymethylpyrimidine phosphate synthase *(ThiC) &...	0.02	OrthoFinder output from all 47 species
GSVIVT01024789001	THIC, PY	Coenzyme metabolism.thiamine pyrophosphate...	0.03	OrthoFinder output from all 47 species
Gb_08645	THIC, PY	hydroxymethylpyrimidine phosphate synthase (ThiC)	0.06	OrthoFinder output from all 47 species
LOC_Os03g47610.6	THIC, PY, LOC_Os03g47610	hydroxymethylpyrimidine phosphate synthase (ThiC)	0.03	OrthoFinder output from all 47 species
MA_10434897g0010	THIC, PY	hydroxymethylpyrimidine phosphate synthase (ThiC)	0.02	OrthoFinder output from all 47 species
Nbi_g18702	THIC, PY	hydroxymethylpyrimidine phosphate synthase *(ThiC) &...	0.03	OrthoFinder output from all 47 species
Zm00001e005154_P001	THIC, PY, Zm00001e005154	hydroxymethylpyrimidine phosphate synthase (ThiC)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006066	alcohol metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006766	vitamin metabolic process	None	Extended
BP	GO:0006767	water-soluble vitamin metabolic process	None	Extended
BP	GO:0006772	thiamine metabolic process	None	Extended
BP	GO:0006790	sulfur compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009110	vitamin biosynthetic process	None	Extended
BP	GO:0009228	thiamine biosynthetic process	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0034308	primary alcohol metabolic process	None	Extended
BP	GO:0034309	primary alcohol biosynthetic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0042364	water-soluble vitamin biosynthetic process	None	Extended
BP	GO:0042723	thiamine-containing compound metabolic process	None	Extended
BP	GO:0042724	thiamine-containing compound biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0044272	sulfur compound biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046165	alcohol biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
MF	GO:0051536	iron-sulfur cluster binding	IEA	Interproscan
MF	GO:0051540	metal cluster binding	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072527	pyrimidine-containing compound metabolic process	None	Extended
BP	GO:0072528	pyrimidine-containing compound biosynthetic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901615	organic hydroxy compound metabolic process	None	Extended
BP	GO:1901617	organic hydroxy compound biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	HCCA
MF	GO:0004386	helicase activity	IEP	HCCA
MF	GO:0005216	monoatomic ion channel activity	IEP	HCCA
MF	GO:0005244	voltage-gated monoatomic ion channel activity	IEP	HCCA
MF	GO:0005247	voltage-gated chloride channel activity	IEP	HCCA
MF	GO:0005253	monoatomic anion channel activity	IEP	HCCA
MF	GO:0005254	chloride channel activity	IEP	HCCA
BP	GO:0006415	translational termination	IEP	HCCA
BP	GO:0006820	monoatomic anion transport	IEP	HCCA
BP	GO:0006821	chloride transport	IEP	HCCA
MF	GO:0008289	lipid binding	IEP	HCCA
MF	GO:0008308	voltage-gated monoatomic anion channel activity	IEP	HCCA
MF	GO:0008509	monoatomic anion transmembrane transporter activity	IEP	HCCA
MF	GO:0010181	FMN binding	IEP	HCCA
MF	GO:0010277	chlorophyllide a oxygenase [overall] activity	IEP	HCCA
MF	GO:0015103	inorganic anion transmembrane transporter activity	IEP	HCCA
MF	GO:0015108	chloride transmembrane transporter activity	IEP	HCCA
MF	GO:0015267	channel activity	IEP	HCCA
BP	GO:0015698	inorganic anion transport	IEP	HCCA
MF	GO:0016462	pyrophosphatase activity	IEP	HCCA
MF	GO:0016701	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	IEP	HCCA
MF	GO:0016703	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)	IEP	HCCA
MF	GO:0016782	transferase activity, transferring sulphur-containing groups	IEP	HCCA
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	HCCA
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	HCCA
MF	GO:0016887	ATP hydrolysis activity	IEP	HCCA
MF	GO:0017076	purine nucleotide binding	IEP	HCCA
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	IEP	HCCA
BP	GO:0022411	cellular component disassembly	IEP	HCCA
MF	GO:0022803	passive transmembrane transporter activity	IEP	HCCA
MF	GO:0022832	voltage-gated channel activity	IEP	HCCA
MF	GO:0022836	gated channel activity	IEP	HCCA
MF	GO:0022839	monoatomic ion gated channel activity	IEP	HCCA
MF	GO:0030554	adenyl nucleotide binding	IEP	HCCA
MF	GO:0032553	ribonucleotide binding	IEP	HCCA
MF	GO:0032555	purine ribonucleotide binding	IEP	HCCA
BP	GO:0032984	protein-containing complex disassembly	IEP	HCCA
MF	GO:0035596	methylthiotransferase activity	IEP	HCCA
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	HCCA
MF	GO:0036094	small molecule binding	IEP	HCCA
MF	GO:0043167	ion binding	IEP	HCCA
MF	GO:0043168	anion binding	IEP	HCCA
BP	GO:0043933	protein-containing complex organization	IEP	HCCA
MF	GO:0050497	alkylthioltransferase activity	IEP	HCCA
MF	GO:0051287	NAD binding	IEP	HCCA
MF	GO:0051539	4 iron, 4 sulfur cluster binding	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
MF	GO:0097367	carbohydrate derivative binding	IEP	HCCA
MF	GO:1901265	nucleoside phosphate binding	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002817	ThiC/BzaA/B	184	604

External Links

No external refs found!

Lfl_g11025 (THIC, PY)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation